RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 TOM1L1O75674 476 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 PRKCBP05771 671 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 TMEM253P0C7T8 217 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 DLATP10515 647 aaKnown RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 TNFAIP3P21580 790 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 KLRC1P26715 233 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 MARK3P27448 753 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 GCNT1Q02742 428 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 LAMTOR4Q0VGL1 99 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 SURF1Q15526 300 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 MAPK6Q16659 721 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 ARHGAP44Q17R89 818 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 TAPT1Q6NXT6 567 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 C15orf39Q6ZRI6 1047 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 DPP9Q86TI2 863 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 ARHGEF19Q8IW93 802 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 FAM71AQ8IYT1 594 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 SYCE1Q8N0S2 351 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 PPM1KQ8N3J5 372 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 MSANTD4Q8NCY6 345 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 ZSWIM2Q8NEG5 633 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 SLC30A5Q8TAD4 765 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 CAGE1Q8TC20 777 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 U2AF1L4Q8WU68 220 aaKnown RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 SHC3Q92529 594 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 DHX38Q92620 1227 aaKnown RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 CGRRF1Q99675 332 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 AGPAT1Q99943 283 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 TARS2Q9BW92 718 aaKnown RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 NFKBIZQ9BYH8 718 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 PDGFCQ9NRA1 345 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 C1orf112Q9NSG2 853 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 RBAKQ9NYW8 714 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 COL11A1P12107 1806 aaPredicted RBP8.49□□□□□ -1.05
SSBP2-213ENST00000509743 ADGRA2Q96PE1 1338 aa8.49□□□□□ -1.05
SSBP2-213ENST00000509743 MANSC4A6NHS7 340 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 FOXN3O00409 490 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 CES2O00748 559 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 MAGEB2O15479 319 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 CLDN3O15551 220 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 BUB1O43683 1085 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 LRRN2O75325 713 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 PPFIA4O75335 1185 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 C22orf31O95567 290 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 LGALS2P05162 132 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 PNMA6AP0CW24 399 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 HOXD8P13378 290 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TNNI1P19237 187 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 MCM3P25205 808 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 MATR3P43243 847 aaKnown RBP eCLIP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 PHKA2P46019 1235 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 MKRN3Q13064 507 aaKnown RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 BRD3Q15059 726 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 ZACNQ401N2 412 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 CCDC181Q5TID7 509 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 CCDC70Q6NSX1 233 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TMCO3Q6UWJ1 677 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 BRSK2Q8IWQ3 736 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 RNF149Q8NC42 400 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 LNX1Q8TBB1 728 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TAS1R2Q8TE23 839 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 CTNNBL1Q8WYA6 563 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 RFFLQ8WZ73 363 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 RUBCNQ92622 972 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TAF4BQ92750 862 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 SEMA4DQ92854 862 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 COPS5Q92905 334 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 MAML3Q96JK9 1138 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 OSBPL9Q96SU4 736 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 PACSIN1Q9BY11 444 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 KATNBL1Q9H079 304 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 ABHD16BQ9H3Z7 469 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 SUGCTQ9HAC7 445 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 TOPORSQ9NS56 1045 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 ANKFY1Q9P2R3 1169 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 SUCLA2Q9P2R7 463 aaPredicted RBP8.48□□□□□ -1.05
SSBP2-213ENST00000509743 HDAC6Q9UBN7 1215 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 SALL4Q9UJQ4 1053 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 LRRC37A2A6NM11 1700 aa8.48□□□□□ -1.05
SSBP2-213ENST00000509743 PTPRFP10586 1907 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 TARSL2A2RTX5 802 aaKnown RBP8.47□□□□□ -1.05
SSBP2-213ENST00000509743 GRID2IPA4D2P6 1211 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 OGTO15294 1046 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 ATP8B1O43520 1251 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 MSCO60682 206 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 ERLIN1O75477 346 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 PALMO75781 387 aa8.47□□□□□ -1.05
SSBP2-213ENST00000509743 SNAI1O95863 264 aaPredicted RBP8.47□□□□□ -1.05
SSBP2-213ENST00000509743 HLA-DRAP01903 254 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms