RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 KIFAP3Q92845 792 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 PNMA5Q96PV4 448 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 KIFC3Q9BVG8 833 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 CXCL16Q9H2A7 254 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 PARP2Q9UGN5 583 aa19.81■□□□□ 0.76
TPM3-220ENST00000509601 PRG3Q9Y2Y8 225 aaPredicted RBP19.81■□□□□ 0.76
TPM3-220ENST00000509601 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.81■□□□□ 0.76
TPM3-220ENST00000509601 F8W810 466 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 CA8P35219 290 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 PRPF4BQ13523 1007 aaKnown RBP19.8■□□□□ 0.76
TPM3-220ENST00000509601 CUL4AQ13619 759 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 PPP2R5AQ15172 486 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 NT5DC1Q5TFE4 455 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 EEF1DP3Q658K8 133 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 RINT1Q6NUQ1 792 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 C1orf186Q6ZWK4 172 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 DEPTORQ8TB45 409 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 SNTG2Q9NY99 539 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 STK39Q9UEW8 545 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 CDH22Q9UJ99 828 aa19.8■□□□□ 0.76
TPM3-220ENST00000509601 N4BP3O15049 544 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 SOD2P04179 222 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 EPCAMP16422 314 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 HERC4Q5GLZ8 1057 aaPredicted RBP19.79■□□□□ 0.76
TPM3-220ENST00000509601 HYIQ5T013 277 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 KIAA0319Q5VV43 1072 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 KANK3Q6NY19 840 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 HACE1Q8IYU2 909 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 C12orf76Q8N812 135 aaPredicted RBP19.79■□□□□ 0.76
TPM3-220ENST00000509601 IFT74Q96LB3 600 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 RUSC1Q9BVN2 902 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 ADAM7Q9H2U9 754 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 MUTYHQ9UIF7 546 aa19.79■□□□□ 0.76
TPM3-220ENST00000509601 SSBP05455 408 aaKnown RBP eCLIP19.78■□□□□ 0.76
TPM3-220ENST00000509601 CNPP09543 421 aaKnown RBP19.78■□□□□ 0.76
TPM3-220ENST00000509601 LIG1P18858 919 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 EFNA5P52803 228 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 MAPK7Q13164 816 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
TPM3-220ENST00000509601 FEZF2Q8TBJ5 459 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 RPGRIP1Q96KN7 1286 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 HERC2P3Q9BVR0 1158 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 COLEC11Q9BWP8 271 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
TPM3-220ENST00000509601 TDRD15B5MCY1 1934 aaKnown RBP19.77■□□□□ 0.76
TPM3-220ENST00000509601 VWA3AA6NCI4 1184 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 HIP1RO75146 1068 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 NPTX2P47972 431 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 PEX3P56589 373 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 GRIK3Q13003 919 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 TPRNQ4KMQ1 711 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 TMEM87AQ8NBN3 555 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 RABGGTAQ92696 567 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 GPR62Q9BZJ7 368 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 MRPL17Q9NRX2 175 aaKnown RBP19.77■□□□□ 0.76
TPM3-220ENST00000509601 CHST7Q9NS84 486 aa19.77■□□□□ 0.76
TPM3-220ENST00000509601 SFI1A8K8P3 1242 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 K7ERI5 159 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 PTGESO14684 152 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 CLCN4P51793 760 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 ITIH3Q06033 890 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 ZRSR1Q15695 479 aaKnown RBP19.76■□□□□ 0.75
TPM3-220ENST00000509601 NAB2Q15742 525 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 TAS1R3Q7RTX0 852 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 PPFIBP1Q86W92 1011 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 KCTD17Q8N5Z5 321 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 SYT2Q8N9I0 419 aaPredicted RBP19.76■□□□□ 0.75
TPM3-220ENST00000509601 RPS6KC1Q96S38 1066 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 PLIN2Q99541 437 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 PAAF1Q9BRP4 392 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 NTPCRQ9BSD7 190 aaKnown RBP19.76■□□□□ 0.75
TPM3-220ENST00000509601 EMILIN2Q9BXX0 1053 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 TMEM134Q9H6X4 195 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 RXFP1Q9HBX9 757 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 CACNG4Q9UBN1 327 aa19.76■□□□□ 0.75
TPM3-220ENST00000509601 CCDC169A6NNP5 214 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 PRR33A8MZF0 331 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 C2CD2LO14523 706 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 NR1I2O75469 434 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 WEE2P0C1S8 567 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 GUCY2CP25092 1073 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 KLRC2P26717 231 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 SLC12A3P55017 1021 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 TMEM132AQ24JP5 1023 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 RARS2Q5T160 578 aaKnown RBP19.75■□□□□ 0.75
TPM3-220ENST00000509601 ATF7IP2Q5U623 682 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 PTPRHQ9HD43 1115 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 DZANK1Q9NVP4 752 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 ARHGAP28Q9P2N2 729 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 TNFSF13BQ9Y275 285 aa19.75■□□□□ 0.75
TPM3-220ENST00000509601 TECTAO75443 2155 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 TEX28O15482 410 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 RECQL4O94761 1208 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 DSG1Q02413 1049 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 TUSC3Q13454 348 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 TMEM119Q4V9L6 283 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 CES5AQ6NT32 575 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 FUT10Q6P4F1 479 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms