RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 POMCP01189 267 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ALDH2P05091 517 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 MRE11P49959 708 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ATP2C1P98194 919 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-208ENST00000509389 MXD4Q14582 209 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-208ENST00000509389 STK38Q15208 465 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 CALCRLQ16602 461 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ADALQ6DHV7 355 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ZBTB33Q86T24 672 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 CNNM3Q8NE01 707 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 PRSS33Q8NF86 280 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 FAM193BQ96PV7 902 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-208ENST00000509389 EIF2AQ9BY44 585 aaKnown RBP16.17■□□□□ 0.18
HMGCL-208ENST00000509389 TTC12Q9H892 705 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-208ENST00000509389 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 PCDHA7Q9UN72 937 aa16.17■□□□□ 0.18
HMGCL-208ENST00000509389 NRP1O14786 923 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 SSBP05455 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGCL-208ENST00000509389 ITGA4P13612 1032 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 AXLP30530 894 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 TXKP42681 527 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGCL-208ENST00000509389 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
HMGCL-208ENST00000509389 KREMEN2Q8NCW0 462 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 ASAP3Q8TDY4 903 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 CPB2Q96IY4 423 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 KLHL5Q96PQ7 755 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 UBN1Q9NPG3 1134 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 STK39Q9UEW8 545 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 FBXO2Q9UK22 296 aaPredicted RBP16.16■□□□□ 0.18
HMGCL-208ENST00000509389 IPPQ9Y573 584 aa16.16■□□□□ 0.18
HMGCL-208ENST00000509389 INO80B-WBP1J3KQ70 363 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 NEMFO60524 1076 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 LILRB3O75022 631 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 DGAT1O75907 488 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 CNPP09543 421 aaKnown RBP16.15■□□□□ 0.18
HMGCL-208ENST00000509389 ARL2P36404 184 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 RARRES1P49788 294 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 POU5F1BQ06416 359 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 CAPSQ13938 189 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 TFDP1Q14186 410 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 AMHR2Q16671 573 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 NOTUMQ6P988 496 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 CABP7Q86V35 215 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 COLGALT2Q8IYK4 626 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 FEZF2Q8TBJ5 459 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 CCDC51Q96ER9 411 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 MTMR9Q96QG7 549 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 EMILIN2Q9BXX0 1053 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 HES2Q9Y543 173 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
HMGCL-208ENST00000509389 DENND4AQ7Z401 1863 aa16.15■□□□□ 0.18
HMGCL-208ENST00000509389 A0A087WWV3 80 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 INPPL1O15357 1258 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 GLRA2P23416 452 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 KLRC2P26717 231 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 CLCN4P51793 760 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 VCPP55072 806 aaKnown RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 MBTD1Q05BQ5 628 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 NCBP1Q09161 790 aaKnown RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 TMC5Q6UXY8 1006 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 GAD1Q99259 594 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 MRPL17Q9NRX2 175 aaKnown RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 MARCH5Q9NX47 278 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 MIOSQ9NXC5 875 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 DBR1Q9UK59 544 aaKnown RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 SORCS3Q9UPU3 1222 aa16.14■□□□□ 0.17
HMGCL-208ENST00000509389 PRG3Q9Y2Y8 225 aaPredicted RBP16.14■□□□□ 0.17
HMGCL-208ENST00000509389 ARL5CA6NH57 179 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 CUTAO60888 179 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PDGFBP01127 241 aaPredicted RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 SOD2P04179 222 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ARF4P18085 180 aaPredicted RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 MLH1P40692 756 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 OR1G1P47890 313 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PTPN5P54829 565 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 MTMR3Q13615 1198 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ARL6IP4Q66PJ3 421 aaKnown RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 TAS1R1Q7RTX1 841 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ZDHHC14Q8IZN3 488 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 TDRD5Q8NAT2 981 aaKnown RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ENGASEQ8NFI3 743 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PRRX2Q99811 253 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 HERC2P3Q9BVR0 1158 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 TMEM60Q9H2L4 133 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 SFXN1Q9H9B4 322 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 TMEM63CQ9P1W3 806 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 SRPRBQ9Y5M8 271 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms