RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 POLD1P28340 1107 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 CHRNA3P32297 505 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 CAP2P40123 477 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 RARRES1P49788 294 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 SLC7A3Q8WY07 619 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
SMG7-214ENST00000508461 LRP5O75197 1615 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 RBAK-RBAKDNI3L0D1 243 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMG7-214ENST00000508461 CHN1P15882 459 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 TFAMQ00059 246 aaKnown RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 KRT17Q04695 432 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 SPIRE1Q08AE8 756 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 CLUL1Q15846 466 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 CYFIP2Q96F07 1278 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 RIT2Q99578 217 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 CARD9Q9H257 536 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 TMBIM4Q9HC24 238 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 HOXD13P35453 343 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 EIF3BP55884 814 aaKnown RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 TMED2Q15363 201 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 HIBCHQ6NVY1 386 aaPredicted RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 PODXLO00592 558 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 CCND2P30279 289 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 CIITAP33076 1130 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 ACTN3Q08043 901 aaPredicted RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 SRRM1Q8IYB3 904 aaKnown RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 EPS8L3Q8TE67 593 aaKnown RBP13.79□□□□□ -0.2
SMG7-214ENST00000508461 SLC5A5Q92911 643 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 PCDHA10Q9Y5I2 948 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
SMG7-214ENST00000508461 GOLGA8MH3BSY2 632 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 PRKCIP41743 596 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 IGBP1P78318 339 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 ALCAMQ13740 583 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 NCAPG2Q86XI2 1143 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 ALG3Q92685 438 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 TATDN2Q93075 761 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 C9orf72Q96LT7 481 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 PHF2O75151 1096 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 HSPA6P17066 643 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 HSPA9P38646 679 aaKnown RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 MAPK7Q13164 816 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 PRMT1Q99873 361 aaKnown RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 KRT76Q01546 638 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
SMG7-214ENST00000508461 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 ERVK-5Q9HDB9 667 aa13.78□□□□□ -0.2
SMG7-214ENST00000508461 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 LRRD1A4D1F6 860 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 NR3C2P08235 984 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 VIL1P09327 827 aaKnown RBP13.77□□□□□ -0.2
SMG7-214ENST00000508461 PYGMP11217 842 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 JAK3P52333 1124 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.2
SMG7-214ENST00000508461 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 ACSF2Q96CM8 615 aaPredicted RBP13.77□□□□□ -0.2
SMG7-214ENST00000508461 RUNDC3BQ96NL0 473 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.2
SMG7-214ENST00000508461 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
SMG7-214ENST00000508461 ICAM1P05362 532 aa13.77□□□□□ -0.21
SMG7-214ENST00000508461 PSAPP07602 524 aa13.77□□□□□ -0.21
SMG7-214ENST00000508461 ATP5DP30049 168 aa13.77□□□□□ -0.21
SMG7-214ENST00000508461 NPTX2P47972 431 aa13.77□□□□□ -0.21
SMG7-214ENST00000508461 DHX34Q14147 1143 aaKnown RBP13.77□□□□□ -0.21
SMG7-214ENST00000508461 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
SMG7-214ENST00000508461 TBC1D1Q86TI0 1168 aaPredicted RBP13.77□□□□□ -0.21
SMG7-214ENST00000508461 ARHGEF2Q92974 986 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms