RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 CDT1Q9H211 546 aa11.21□□□□□ -0.61
HTT-204ENST00000508321 TOPORSQ9NS56 1045 aaPredicted RBP11.21□□□□□ -0.61
HTT-204ENST00000508321 LRFN2Q9ULH4 789 aa11.21□□□□□ -0.61
HTT-204ENST00000508321 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
HTT-204ENST00000508321 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
HTT-204ENST00000508321 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
HTT-204ENST00000508321 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
HTT-204ENST00000508321 A0A0B4J269 797 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 CARNS1A5YM72 827 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 ENPP3O14638 875 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 OGTO15294 1046 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 NPTXRO95502 500 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 GRM5P41594 1212 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 MATR3P43243 847 aaKnown RBP eCLIP11.2□□□□□ -0.62
HTT-204ENST00000508321 UBXN11Q5T124 520 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 ECHDC2Q86YB7 292 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 SLC9A9Q8IVB4 645 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 GLIS3Q8NEA6 775 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 TSPAN18Q96SJ8 248 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 TSG101Q99816 390 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 TCHPQ9BT92 498 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 MSTO1Q9BUK6 570 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 MRPL9Q9BYD2 267 aaKnown RBP11.2□□□□□ -0.62
HTT-204ENST00000508321 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 KIAA1586Q9HCI6 787 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 AGPAT3Q9NRZ7 376 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 TMEM63CQ9P1W3 806 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 TRAF3IP3Q9Y228 551 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 IPPQ9Y573 584 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 ANK1P16157 1881 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 GBF1Q92538 1859 aa11.2□□□□□ -0.62
HTT-204ENST00000508321 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 INPPL1O15357 1258 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 ITGA4P13612 1032 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 RPL13P26373 211 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 PRCPP42785 496 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 YARSP54577 528 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 NLRP12P59046 1061 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 KCNA1Q09470 495 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 PAK1Q13153 545 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 STX1AQ16623 288 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 SLC39A4Q6P5W5 647 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 NELFCDQ8IXH7 590 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 POMGNT1Q8WZA1 660 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 TOP1MTQ969P6 601 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 ANO10Q9NW15 660 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
HTT-204ENST00000508321 GIT1Q9Y2X7 761 aa11.19□□□□□ -0.62
HTT-204ENST00000508321 BIN1O00499 593 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 TGFB1I1O43294 461 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 EXTL3O43909 919 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 FAM189A1O60320 539 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 GJB5O95377 273 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 CLTAP09496 248 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 CCDC192P0DO97 292 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 CCNE1P24864 410 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 ERCC5P28715 1186 aaPredicted RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 HOXD13P35453 343 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 DEFB103AP81534 67 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 ENPEPQ07075 957 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 C9orf50Q5SZB4 431 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 GLB1LQ6UWU2 654 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
HTT-204ENST00000508321 USP37Q86T82 979 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 CD302Q8IX05 232 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 SMYD4Q8IYR2 804 aaPredicted RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 CMTR2Q8IYT2 770 aaKnown RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 LRRC43Q8N309 656 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 GPD1LQ8N335 351 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 P2RX5Q93086 422 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 FBXL18Q96ME1 805 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
HTT-204ENST00000508321 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 CXXC1Q9P0U4 656 aaPredicted RBP11.18□□□□□ -0.62
HTT-204ENST00000508321 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms