RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 RIPOR3Q96MK2 946 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 NACC1Q96RE7 527 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 HERC2P3Q9BVR0 1158 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 EMILIN2Q9BXX0 1053 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 KCNH6Q9H252 994 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 EDN1P05305 212 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 OR1G1P47890 313 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 TRAPPC10P48553 1259 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.16e-12■■■■□ 24
HMGCS1-205ENST00000508319 ECM1Q16610 540 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 FAM187BQ17R55 369 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 HAUS3Q68CZ6 603 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 TAS1R1Q7RTX1 841 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 CABP7Q86V35 215 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 HACE1Q8IYU2 909 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 C4orf32Q8N8J7 132 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 PBXIP1Q96AQ6 731 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 FZD8Q9H461 694 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 PRMT7Q9NVM4 692 aaPredicted RBP14.4□□□□□ -0.1
HMGCS1-205ENST00000508319 C2CD2LO14523 706 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 URODP06132 367 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 CYP11B2P19099 503 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 MUTP22033 750 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 U2AF2P26368 475 aaKnown RBP eCLIP14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 KLRC2P26717 231 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 GLUD2P49448 558 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 GRIK3Q13003 919 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 GNL2Q13823 731 aaKnown RBP14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 TMC5Q6UXY8 1006 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 FAM184AQ8NB25 1140 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 CCDC113Q9H0I3 377 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
HMGCS1-205ENST00000508319 ARHGEF35A5YM69 484 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 TEX28O15482 410 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 NAMPTP43490 491 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 NHLH1Q02575 133 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 MTMR3Q13615 1198 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 ATAT1Q5SQI0 421 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 GPR149Q86SP6 731 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 FBXL6Q8N531 539 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 IGSF22Q8N9C0 903 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 KREMEN2Q8NCW0 462 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 C2orf40Q9H1Z8 148 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 MAN1C1Q9NR34 630 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 KLK14Q9P0G3 267 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 SORCS3Q9UPU3 1222 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
HMGCS1-205ENST00000508319 MTCL1Q9Y4B5 1905 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 N4BP3O15049 544 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 NR1I2O75469 434 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 BRD1O95696 1058 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 PRKCBP05771 671 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 CENPBP07199 599 aaPredicted RBP14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 ADH1AP07327 375 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 CCT6AP40227 531 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 DSG1Q02413 1049 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 MAPK6Q16659 721 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 FUT10Q6P4F1 479 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 ZBTB33Q86T24 672 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 SUGP1Q8IWZ8 645 aaKnown RBP14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 ZDHHC14Q8IZN3 488 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 B3GALT6Q96L58 329 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 KIFC3Q9BVG8 833 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 GPR62Q9BZJ7 368 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 SMOC2Q9H3U7 446 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 LRWD1Q9UFC0 647 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 PARP2Q9UGN5 583 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 ADAM28Q9UKQ2 775 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 SSX2IPQ9Y2D8 614 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 USP20Q9Y2K6 914 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 VWA8A3KMH1 1905 aa14.37□□□□□ -0.11
HMGCS1-205ENST00000508319 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 ACKR2O00590 384 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PTGESO14684 152 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 RECQL4O94761 1208 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 GLUD1P00367 558 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 ASGR2P07307 311 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PTGDRQ13258 359 aa14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PRPF4BQ13523 1007 aaKnown RBP14.36□□□□□ -0.11
HMGCS1-205ENST00000508319 PDIA5Q14554 519 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms