RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CCDC136Q96JN2 1154 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 PDCD2LQ9BRP1 358 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 ENKD1Q9H0I2 346 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 C14orf93Q9H972 538 aaKnown RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 CHST12Q9NRB3 414 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 GPRC5DQ9NZD1 345 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 MROH6A6NGR9 719 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 LRRC14BA6NHZ5 514 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 H3BML4 177 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 ARHGAP6O43182 974 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 DAPK3O43293 454 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 MTSS1O43312 755 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 B3GALT2O43825 422 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CAND2O75155 1236 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 ITGA10O75578 1167 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 TUSC2O75896 110 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CNOT4O95628 575 aaKnown RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 VSIG10L2P0DP72 767 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 ECHS1P30084 290 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 GUCY1A2P33402 732 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 MAP2K6P52564 334 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 WNT3AP56704 352 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 BPIFB4P59827 614 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 ATP8B2P98198 1209 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 ZMAT1Q5H9K5 638 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 TCERG1LQ5VWI1 586 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CIAPIN1Q6FI81 312 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 MIGA2Q7L4E1 593 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CHST15Q7LFX5 561 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 ADGRE4PQ86SQ3 457 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 COL23A1Q86Y22 540 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 DENND1CQ8IV53 801 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 TMEM151BQ8IW70 566 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 RHOT1Q8IXI2 618 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 ANKRD53Q8N9V6 530 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 FBXO18Q8NFZ0 1043 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 OR7D4Q8NG98 312 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 C1GALT1C1Q96EU7 318 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 RPL10LQ96L21 214 aaKnown RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 MRGPRX4Q96LA9 322 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 FAM193BQ96PV7 902 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 CGRRF1Q99675 332 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 C7orf25Q9BPX7 421 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 SLC6A15Q9H2J7 730 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 BCO1Q9HAY6 547 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 C1orf112Q9NSG2 853 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 CFAP20Q9Y6A4 193 aaKnown RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 SLC4A7Q9Y6M7 1214 aa4.46□□□□□ -1.7
LSM6-205ENST00000507449 FRMPD2Q68DX3 1309 aaPredicted RBP4.46□□□□□ -1.7
LSM6-205ENST00000507449 ATRNL1Q5VV63 1379 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 TRIM13O60858 407 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 DTNBO60941 627 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 PHF2O75151 1096 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 UBXN7O94888 489 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 ENDOD1O94919 500 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 SYN1P17600 705 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 PCSK1P29120 753 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 CASRP41180 1078 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 CDC42EP1Q00587 391 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 HLTFQ14527 1009 aaKnown RBP eCLIP4.45□□□□□ -1.7
LSM6-205ENST00000507449 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 IFI44Q8TCB0 444 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 LPPQ93052 612 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 SLC39A13Q96H72 371 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 SARGQ9BW04 601 aa4.45□□□□□ -1.7
LSM6-205ENST00000507449 AGO3Q9H9G7 860 aaKnown RBP4.45□□□□□ -1.7
LSM6-205ENST00000507449 DDX21Q9NR30 783 aaKnown RBP eCLIP4.45□□□□□ -1.7
LSM6-205ENST00000507449 TPP1O14773 563 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 SGTAO43765 313 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 B4GALT4O60513 344 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 JUNP05412 331 aaKnown RBP4.44□□□□□ -1.7
LSM6-205ENST00000507449 KRT18P05783 430 aaKnown RBP4.44□□□□□ -1.7
LSM6-205ENST00000507449 TRIM27P14373 513 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 FPR1P21462 350 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 HTR1BP28222 390 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 CRHR1P34998 444 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 DUSP8Q13202 625 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 MTM1Q13496 603 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 LLGL1Q15334 1064 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 PRAMEF14Q5SWL7 426 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 NT5DC1Q5TFE4 455 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 SWSAP1Q6NVH7 229 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 KSR2Q6VAB6 950 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 DRC7Q8IY82 874 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 GPR135Q8IZ08 494 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 KIAA0319LQ8IZA0 1049 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 PQLC1Q8N2U9 271 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 CAMKK1Q8N5S9 505 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 CCHCR1Q8TD31 782 aa4.44□□□□□ -1.7
LSM6-205ENST00000507449 RABGGTAQ92696 567 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms