RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 DLX2Q07687 328 aaPredicted RBP17.15■□□□□ 0.34
CLDND1-211ENST00000506575 DUSP6Q16828 381 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 DCAF4L1Q3SXM0 396 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 ATF7IP2Q5U623 682 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 TMEM173Q86WV6 379 aaPredicted RBP17.15■□□□□ 0.34
CLDND1-211ENST00000506575 KLK14Q9P0G3 267 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 KCNG1Q9UIX4 513 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 USP20Q9Y2K6 914 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
CLDND1-211ENST00000506575 MUC3AQ02505 3323 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 NRP1O14786 923 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 B4GALT3O60512 393 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 CXCL14O95715 111 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 GRIN1Q05586 938 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 MAPK7Q13164 816 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 MRPL43Q8N983 215 aaKnown RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
CLDND1-211ENST00000506575 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 PRG3Q9Y2Y8 225 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-211ENST00000506575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.13■□□□□ 0.33
CLDND1-211ENST00000506575 C2orf71A6NGG8 1288 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 SLC16A4O15374 487 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 EDN1P05305 212 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 PLS3P13797 630 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 PLCG1P19174 1290 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 GRIK3Q13003 919 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
CLDND1-211ENST00000506575 GIT2Q14161 759 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 DHX8Q14562 1220 aaKnown RBP17.13■□□□□ 0.33
CLDND1-211ENST00000506575 PTPAQ15257 358 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 NT5DC1Q5TFE4 455 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 LLGL2Q6P1M3 1020 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 COLGALT2Q8IYK4 626 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 MRPL4Q9BYD3 311 aaKnown RBP17.13■□□□□ 0.33
CLDND1-211ENST00000506575 ZBP1Q9H171 429 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 MIOSQ9NXC5 875 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 SNTG2Q9NY99 539 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 ARHGAP28Q9P2N2 729 aa17.13■□□□□ 0.33
CLDND1-211ENST00000506575 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
CLDND1-211ENST00000506575 MYH15Q9Y2K3 1946 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 MBTPS2O43462 519 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 GLP2RO95838 553 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 KRT18P05783 430 aaKnown RBP17.12■□□□□ 0.33
CLDND1-211ENST00000506575 CTSAP10619 480 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 PDIA4P13667 645 aaKnown RBP17.12■□□□□ 0.33
CLDND1-211ENST00000506575 TXLNAP40222 546 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 DSC1Q08554 894 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 STRN3Q13033 797 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 FAM178BQ8IXR5 827 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 SPIRE2Q8WWL2 714 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 LARSQ9P2J5 1176 aaKnown RBP17.12■□□□□ 0.33
CLDND1-211ENST00000506575 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
CLDND1-211ENST00000506575 ODF2LQ9ULJ1 636 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 TNFSF13BQ9Y275 285 aa17.12■□□□□ 0.33
CLDND1-211ENST00000506575 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 H0YCG3 227 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 RECQL4O94761 1208 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 COASYQ13057 564 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 MCM6Q14566 821 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 SPECC1Q5M775 1068 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 LARP4BQ92615 738 aaKnown RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 RAD54LQ92698 747 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
CLDND1-211ENST00000506575 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 BLOC1S4Q9NUP1 217 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 GDAQ9Y2T3 454 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 IRAK3Q9Y616 596 aa17.11■□□□□ 0.33
CLDND1-211ENST00000506575 FAM13AO94988 1023 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 THP07101 528 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 STK38Q15208 465 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 SMRP1Q8NCR6 262 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 GSTCDQ8NEC7 633 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms