RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 A0A1B0GUA9 196 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 TEX28O15482 410 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 MYBP10242 640 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 XRCC6P12956 609 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNHG4-202ENST00000505522 GLUD2P49448 558 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 DSG1Q02413 1049 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 SLC27A1Q6PCB7 646 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 MAN1C1Q9NR34 630 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 TTLL13PA6NNM8 815 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 ADH1AP07327 375 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CDCA2Q69YH5 1023 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-202ENST00000505522 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-202ENST00000505522 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
SNHG4-202ENST00000505522 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CHST7Q9NS84 486 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 SSX2IPQ9Y2D8 614 aa13.53□□□□□ -0.24
SNHG4-202ENST00000505522 USP34Q70CQ2 3546 aa13.52□□□□□ -0.24
SNHG4-202ENST00000505522 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.24
SNHG4-202ENST00000505522 N4BP1O75113 896 aaKnown RBP13.52□□□□□ -0.25
SNHG4-202ENST00000505522 NR1I2O75469 434 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 RFPL2O75678 378 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 GLUD1P00367 558 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 GRIK3Q13003 919 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNHG4-202ENST00000505522 ZNF174Q15697 407 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 FUT10Q6P4F1 479 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 OTOP3Q7RTS5 596 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 TMEM105Q8N8V8 129 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 MCPH1Q8NEM0 835 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 ACSF2Q96CM8 615 aaPredicted RBP13.52□□□□□ -0.25
SNHG4-202ENST00000505522 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 NACC1Q96RE7 527 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 FZD8Q9H461 694 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 LIMCH1Q9UPQ0 1083 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 USP20Q9Y2K6 914 aa13.52□□□□□ -0.25
SNHG4-202ENST00000505522 ZMYM2Q9UBW7 1377 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 EDN1P05305 212 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 OR52Z1P0C646 297 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 RPA1P27694 616 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 FAM187BQ17R55 369 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PADI6Q6TGC4 694 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PALB2Q86YC2 1186 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PRIMPOLQ96LW4 560 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 CXCL16Q9H2A7 254 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 PRMT7Q9NVM4 692 aaPredicted RBP13.51□□□□□ -0.25
SNHG4-202ENST00000505522 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
SNHG4-202ENST00000505522 ARHGEF35A5YM69 484 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 H0Y858 1186 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 ECM1Q16610 540 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 USP41Q3LFD5 358 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 GLYCTKQ8IVS8 523 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 C4orf32Q8N8J7 132 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 FBXO18Q8NFZ0 1043 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
SNHG4-202ENST00000505522 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
SNHG4-202ENST00000505522 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
SNHG4-202ENST00000505522 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
SNHG4-202ENST00000505522 KCNK12Q9HB15 430 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
SNHG4-202ENST00000505522 SNTG2Q9NY99 539 aa13.5□□□□□ -0.25
SNHG4-202ENST00000505522 CLUHO75153 1309 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 CASTOR2A6NHX0 329 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 PTGESO14684 152 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 N4BP3O15049 544 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 TGM5O43548 720 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
SNHG4-202ENST00000505522 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
SNHG4-202ENST00000505522 TADA2AO75478 443 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 RECQL4O94761 1208 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 PAPLNO95428 1278 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 PRKCBP05771 671 aa13.49□□□□□ -0.25
SNHG4-202ENST00000505522 RPL17P18621 184 aaKnown RBP13.49□□□□□ -0.25
SNHG4-202ENST00000505522 LIG1P18858 919 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms