RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 TRIM9Q9C026 710 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SLC52A2Q9HAB3 445 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CYLDQ9NQC7 956 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 WARS2Q9UGM6 360 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ANAPC7Q9UJX3 599 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 URB1O60287 2271 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PAPPA2Q9BXP8 1791 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ZNF263O14978 683 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 INHBAP08476 426 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MAPK4P31152 587 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MRPL12P52815 198 aaKnown RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 GSCP56915 257 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 BFSP1Q12934 665 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 IGDCC4Q8TDY8 1250 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 SH3RF3Q8TEJ3 882 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MMADHCQ9H3L0 296 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 HEY2Q9UBP5 337 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 DNAJC12Q9UKB3 198 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 NUMBP49757 651 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 EVX2Q03828 476 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MED21Q13503 144 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 CPXCR1Q8N123 301 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 RIBC1Q8N443 379 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ERMNQ8TAM6 284 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 SLC35G2Q8TBE7 412 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 PYDC1Q8WXC3 89 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 FAM129AQ9BZQ8 928 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 PALMDQ9NP74 551 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 FAM53CQ9NYF3 392 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 GINS2Q9Y248 185 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ARAP2Q8WZ64 1704 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 COL15A1P39059 1388 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 SMAPO00193 183 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ORC4O43929 436 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 EIF3BP55884 814 aaKnown RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 C16orf72Q14CZ0 275 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRIM50Q86XT4 487 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 FAM186BQ8IYM0 893 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 PPM1NQ8N819 430 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 CNKSR2Q8WXI2 1034 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 IP6K1Q92551 441 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TATDN2Q93075 761 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 OPTNQ96CV9 577 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MTBPQ96DY7 904 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 PBKQ96KB5 322 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRIM55Q9BYV6 548 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 C10orf88Q9H8K7 445 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ANAPC4Q9UJX5 808 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 USP21Q9UK80 565 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 NUP98P52948 1817 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 HOXA13P31271 388 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 PCYT1AP49585 367 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 OTUD4Q01804 1114 aaKnown RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MCL1Q07820 350 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 DRAP1Q14919 205 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 RNF207Q6ZRF8 634 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TBC1D22AQ8WUA7 517 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 RSAD2Q8WXG1 361 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ZNF570Q96NI8 536 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 FNBP1Q96RU3 617 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 NDNQ99608 321 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 EPAS1Q99814 870 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 CALN1Q9BXU9 219 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 KIAA1683Q9H0B3 1180 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 ISCUQ9H1K1 167 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 TRABDQ9H4I3 376 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 CAAP1Q9H8G2 361 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 AXIN2Q9Y2T1 843 aa8.31□□□□□ -1.08
ATP2C1-208ENST00000504948 MYO3BQ8WXR4 1341 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 MYMKA6NI61 221 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 F8VZ95 297 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 RPS6KA5O75582 802 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 PDE8BO95263 885 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 PYGBP11216 843 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 TNNI1P19237 187 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 MARK3P27448 753 aa8.3□□□□□ -1.08
ATP2C1-208ENST00000504948 ADCY7P51828 1080 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms