RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CCDC62Q6P9F0 684 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 GJB7Q6PEY0 223 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 NOA1Q8NC60 698 aaKnown RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 OLIG1Q8TAK6 271 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 PLEKHO2Q8TD55 490 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ACTRT1Q8TDG2 376 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ATP8B4Q8TF62 1192 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 U2AF1L4Q8WU68 220 aaKnown RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 SCFD2Q8WU76 684 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 BICD1Q96G01 975 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 PCYT2Q99447 389 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 PAGR1Q9BTK6 254 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 FUT8Q9BYC5 575 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 UBXN6Q9BZV1 441 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 SMARCAD1Q9H4L7 1026 aa10.59□□□□□ -0.71
COL1A1-210ENST00000504289 AJAP1Q9UKB5 411 aaPredicted RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 AGO2Q9UKV8 859 aaKnown RBP10.59□□□□□ -0.71
COL1A1-210ENST00000504289 ADGRA3Q8IWK6 1321 aa10.58□□□□□ -0.71
COL1A1-210ENST00000504289 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 SIP14410 1827 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 A0A0B4J269 797 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 RBM47A0AV96 593 aaKnown RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 MIF4GDA9UHW6 222 aaKnown RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 TISP43B9A030 160 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 CCDC188H7C350 402 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 PDE2AO00408 941 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 NOP56O00567 594 aaKnown RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 HBP1O60381 514 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 SRGAP2O75044 1071 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 RTN2O75298 545 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 KIF4AO95239 1232 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 NOP2P46087 812 aaKnown RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 GTF2A2P52657 109 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 TFDP1Q14186 410 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 TTLL4Q14679 1199 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 ZACNQ401N2 412 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 NFRKBQ6P4R8 1299 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 SV2AQ7L0J3 742 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 COG1Q8WTW3 980 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 FAXDC2Q96IV6 333 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 CAPZA3Q96KX2 299 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 FGD4Q96M96 766 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 PNKPQ96T60 521 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 NAP1L3Q99457 506 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-210ENST00000504289 GPR20Q99678 358 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 NFKBIZQ9BYH8 718 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 ABCB6Q9NP58 842 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 VTA1Q9NP79 307 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 MORF4L1Q9UBU8 362 aa10.58□□□□□ -0.72
COL1A1-210ENST00000504289 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 TBXAS1P24557 533 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 VSNL1P62760 191 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 TNNC1P63316 161 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 GPC5P78333 572 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 SP4Q02446 784 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 NNTQ13423 1086 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 LAMC2Q13753 1193 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ARHGAP44Q17R89 818 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 WDR44Q5JSH3 913 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ZNF484Q5JVG2 852 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 C11orf63Q6NUN7 778 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 PEX26Q7Z412 305 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ARHGEF19Q8IW93 802 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ZBTB8OSQ8IWT0 167 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 RASGEF1CQ8N431 466 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 HELQQ8TDG4 1101 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ASAP3Q8TDY4 903 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 HES6Q96HZ4 224 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 RPS6KC1Q96S38 1066 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 SH2D3AQ9BRG2 576 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 PACSIN1Q9BY11 444 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 MRPL4Q9BYD3 311 aaKnown RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 C1orf112Q9NSG2 853 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 TMEM59LQ9UK28 342 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 NOCTQ9UK39 431 aaKnown RBP10.57□□□□□ -0.72
COL1A1-210ENST00000504289 AMFRQ9UKV5 643 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 ADGRA2Q96PE1 1338 aa10.57□□□□□ -0.72
COL1A1-210ENST00000504289 COL1A2P08123 1366 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 DOCK5Q9H7D0 1870 aa10.56□□□□□ -0.72
COL1A1-210ENST00000504289 GOLGA8IPA6NC78 632 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms