RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 AMHR2Q16671 573 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 ATAT1Q5SQI0 421 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 KRT79Q5XKE5 535 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
MED28-203ENST00000503945 DEPTORQ8TB45 409 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 AUTS2Q8WXX7 1259 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 FZD8Q9H461 694 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
MED28-203ENST00000503945 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 MIOSQ9NXC5 875 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
MED28-203ENST00000503945 B4GALT5O43286 388 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 NPTXRO95502 500 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
MED28-203ENST00000503945 AKAP5P24588 427 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 MLH1P40692 756 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 PRPF4BQ13523 1007 aaKnown RBP13.21□□□□□ -0.29
MED28-203ENST00000503945 NBR1Q14596 966 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 RILPL1Q5EBL4 403 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 CDR2LQ86X02 465 aaPredicted RBP13.21□□□□□ -0.29
MED28-203ENST00000503945 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 RIPOR3Q96MK2 946 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 NECTIN4Q96NY8 510 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
MED28-203ENST00000503945 USP34Q70CQ2 3546 aa13.21□□□□□ -0.3
MED28-203ENST00000503945 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 ACKR2O00590 384 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 INPPL1O15357 1258 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 LIG1P18858 919 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 PRPHP41219 470 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 NAMPTP43490 491 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 SCNN1GP51170 649 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 EFNA5P52803 228 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 ECM1Q16610 540 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 CABP7Q86V35 215 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 KREMEN2Q8NCW0 462 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
MED28-203ENST00000503945 KIFAP3Q92845 792 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 ATOH1Q92858 354 aaPredicted RBP13.2□□□□□ -0.3
MED28-203ENST00000503945 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 KLHL5Q96PQ7 755 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 POMKQ9H5K3 350 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
MED28-203ENST00000503945 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 KCNG1Q9UIX4 513 aa13.2□□□□□ -0.3
MED28-203ENST00000503945 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
MED28-203ENST00000503945 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
MED28-203ENST00000503945 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 H0Y858 1186 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 K7ERI5 159 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 C2CD2LO14523 706 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 N4BP3O15049 544 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 B4GALT3O60512 393 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 LILRB3O75022 631 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 TADA2AO75478 443 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 SOD2P04179 222 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 WEE2P0C1S8 567 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 GJB2P29033 226 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 MTHFRP42898 656 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 DSC1Q08554 894 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
MED28-203ENST00000503945 CDCA2Q69YH5 1023 aaPredicted RBP13.19□□□□□ -0.3
MED28-203ENST00000503945 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
MED28-203ENST00000503945 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
MED28-203ENST00000503945 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 RPS6KC1Q96S38 1066 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 NXF3Q9H4D5 531 aaKnown RBP13.19□□□□□ -0.3
MED28-203ENST00000503945 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
MED28-203ENST00000503945 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 BRD1O95696 1058 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 PRKCBP05771 671 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 URODP06132 367 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
MED28-203ENST00000503945 EPCAMP16422 314 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 CDC25AP30304 524 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
MED28-203ENST00000503945 IL17AQ16552 155 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
MED28-203ENST00000503945 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 GSTCDQ8NEC7 633 aa13.18□□□□□ -0.3
MED28-203ENST00000503945 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms