RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP46-204ENST00000503060 CXCL11O14625 94 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 PALMO75781 387 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 ATG7O95352 703 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 CAPN2P17655 700 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 GCLMP48507 274 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 CETN1Q12798 172 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.41
USP46-204ENST00000503060 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.41
USP46-204ENST00000503060 CDCA5Q96FF9 252 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
USP46-204ENST00000503060 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 SPDYE5A6NIY4 337 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 EDNRBP24530 442 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 CNGA1P29973 690 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 MTERF2Q49AM1 385 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 MICALL1Q8N3F8 863 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 POLR3FQ9H1D9 316 aaPredicted RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 PMM2O15305 246 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 ERLIN1O75477 346 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 CNMDO75829 334 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP46-204ENST00000503060 NF2P35240 595 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 VSNL1P62760 191 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 SNRNP35Q16560 246 aaKnown RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 MOB2Q70IA6 237 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 SLC30A5Q8TAD4 765 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 IFT74Q96LB3 600 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 MAFBQ9Y5Q3 323 aaPredicted RBP12.51□□□□□ -0.41
USP46-204ENST00000503060 ADGRA3Q8IWK6 1321 aa12.51□□□□□ -0.41
USP46-204ENST00000503060 GRID2IPA4D2P6 1211 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 OATP04181 439 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 H2AFZP0C0S5 128 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 ATP4AP20648 1035 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 MXI1P50539 228 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 ITIH3Q06033 890 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 CCDC92Q53HC0 331 aaPredicted RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 H2AFVQ71UI9 128 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 PSMB7Q99436 277 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 TMEM117Q9H0C3 514 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 KCNH4Q9UQ05 1017 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 SASH3O75995 380 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 FTCDO95954 541 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 CXCR5P32302 372 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 C2orf54Q08AI8 447 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 PPIL2Q13356 520 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 EMC2Q15006 297 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 IFI16Q16666 785 aaKnown RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 FUT8Q9BYC5 575 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 ABCB6Q9NP58 842 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
USP46-204ENST00000503060 ARHGAP28Q9P2N2 729 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
USP46-204ENST00000503060 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 TARSL2A2RTX5 802 aaKnown RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 H0YCG3 227 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 LRRN2O75325 713 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 CD53P19397 219 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 KIF22Q14807 665 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 TAS1R3Q7RTX0 852 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 MMGT1Q8N4V1 131 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 MYH9P35579 1960 aaKnown RBP12.49□□□□□ -0.41
USP46-204ENST00000503060 GSTTP1A0A1W2PQM5 241 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 SLC25A27O95847 323 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 ATICP31939 592 aa12.49□□□□□ -0.41
USP46-204ENST00000503060 NOP2P46087 812 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms