RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CSPG5O95196 566 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 POMCP01189 267 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ITGB1P05556 798 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 PFKFB1P16118 471 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 GAP43P17677 238 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 SCP2P22307 547 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 NMT1P30419 496 aaKnown RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 HOXD11P31277 338 aaPredicted RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 PBX3P40426 434 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 MLH1P40692 756 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 MATR3P43243 847 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP46-203ENST00000502443 AFMP43652 599 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ALDH7A1P49419 539 aaKnown RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 BCAR1P56945 870 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 PTPROQ16827 1216 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 DCAF4L1Q3SXM0 396 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZNF568Q3ZCX4 644 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZC2HC1CQ53FD0 456 aaPredicted RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 HERC4Q5GLZ8 1057 aaPredicted RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 KCNT2Q6UVM3 1135 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZNF280BQ86YH2 543 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 CCDC65Q8IXS2 484 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 THNSL1Q8IYQ7 743 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 CEP57L1Q8IYX8 460 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 COLGALT1Q8NBJ5 622 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 SLC17A8Q8NDX2 589 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 P2RX5Q93086 422 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZFP42Q96MM3 310 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ZNF558Q96NG5 402 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 IPO9Q96P70 1041 aaKnown RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 FAM193BQ96PV7 902 aaPredicted RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 TRIM9Q9C026 710 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 GBP3Q9H0R5 595 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 MAGEF1Q9HAY2 307 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 SNTG2Q9NY99 539 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 KLK14Q9P0G3 267 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 ANKFY1Q9P2R3 1169 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 SEL1LQ9UBV2 794 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 GDAQ9Y2T3 454 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 GIT1Q9Y2X7 761 aa8.01□□□□□ -1.13
USP46-203ENST00000502443 TDRD15B5MCY1 1934 aaKnown RBP8.01□□□□□ -1.13
USP46-203ENST00000502443 PLXNA4Q9HCM2 1894 aa8□□□□□ -1.13
USP46-203ENST00000502443 A0A1W2PQ27 194 aa8□□□□□ -1.13
USP46-203ENST00000502443 A0A1W2PQ64 194 aa8□□□□□ -1.13
USP46-203ENST00000502443 A0A1W2PQD8 194 aa8□□□□□ -1.13
USP46-203ENST00000502443 NT5C1B-RDH14C9J2C7 533 aa8□□□□□ -1.13
USP46-203ENST00000502443 CLDN3O15551 220 aa8□□□□□ -1.13
USP46-203ENST00000502443 TOM1L1O75674 476 aa8□□□□□ -1.13
USP46-203ENST00000502443 FGF18O76093 207 aa8□□□□□ -1.13
USP46-203ENST00000502443 RECQL4O94761 1208 aa8□□□□□ -1.13
USP46-203ENST00000502443 DDHD2O94830 711 aa8□□□□□ -1.13
USP46-203ENST00000502443 GCNT3O95395 438 aa8□□□□□ -1.13
USP46-203ENST00000502443 SLFN14P0C7P3 912 aa8□□□□□ -1.13
USP46-203ENST00000502443 HARSP12081 509 aaKnown RBP8□□□□□ -1.13
USP46-203ENST00000502443 POU3F3P20264 500 aaPredicted RBP8□□□□□ -1.13
USP46-203ENST00000502443 CASP1P29466 404 aa8□□□□□ -1.13
USP46-203ENST00000502443 ABCD1P33897 745 aa8□□□□□ -1.13
USP46-203ENST00000502443 PPM1AP35813 382 aa8□□□□□ -1.13
USP46-203ENST00000502443 SYKP43405 635 aa8□□□□□ -1.13
USP46-203ENST00000502443 LIG4P49917 911 aa8□□□□□ -1.13
USP46-203ENST00000502443 SCNN1GP51170 649 aa8□□□□□ -1.13
USP46-203ENST00000502443 NDUFA8P51970 172 aa8□□□□□ -1.13
USP46-203ENST00000502443 OSTNP61366 133 aa8□□□□□ -1.13
USP46-203ENST00000502443 ASIC1P78348 528 aa8□□□□□ -1.13
USP46-203ENST00000502443 GTF2BQ00403 316 aa8□□□□□ -1.13
USP46-203ENST00000502443 KRT17Q04695 432 aa8□□□□□ -1.13
USP46-203ENST00000502443 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
USP46-203ENST00000502443 ZPBP2Q6X784 338 aa8□□□□□ -1.13
USP46-203ENST00000502443 ZNF720Q7Z2F6 126 aa8□□□□□ -1.13
USP46-203ENST00000502443 FSIP1Q8NA03 581 aa8□□□□□ -1.13
USP46-203ENST00000502443 SPPL3Q8TCT6 385 aa8□□□□□ -1.13
USP46-203ENST00000502443 MRPS27Q92552 414 aaKnown RBP8□□□□□ -1.13
USP46-203ENST00000502443 MRPL38Q96DV4 380 aaKnown RBP8□□□□□ -1.13
USP46-203ENST00000502443 ZBTB45Q96K62 511 aaPredicted RBP8□□□□□ -1.13
USP46-203ENST00000502443 RPS6KC1Q96S38 1066 aa8□□□□□ -1.13
USP46-203ENST00000502443 FIZ1Q96SL8 496 aa8□□□□□ -1.13
USP46-203ENST00000502443 C7orf25Q9BPX7 421 aa8□□□□□ -1.13
USP46-203ENST00000502443 CDT1Q9H211 546 aa8□□□□□ -1.13
USP46-203ENST00000502443 BLZF1Q9H2G9 400 aa8□□□□□ -1.13
USP46-203ENST00000502443 ST6GALNAC4Q9H4F1 302 aa8□□□□□ -1.13
USP46-203ENST00000502443 NRDE2Q9H7Z3 1164 aa8□□□□□ -1.13
USP46-203ENST00000502443 PTPRHQ9HD43 1115 aa8□□□□□ -1.13
USP46-203ENST00000502443 MIOSQ9NXC5 875 aa8□□□□□ -1.13
USP46-203ENST00000502443 SPG21Q9NZD8 308 aa8□□□□□ -1.13
USP46-203ENST00000502443 LMCD1Q9NZU5 365 aa8□□□□□ -1.13
USP46-203ENST00000502443 CHMP5Q9NZZ3 219 aa8□□□□□ -1.13
USP46-203ENST00000502443 DNAJB4Q9UDY4 337 aa8□□□□□ -1.13
USP46-203ENST00000502443 USP25Q9UHP3 1055 aa8□□□□□ -1.13
USP46-203ENST00000502443 SERTAD1Q9UHV2 236 aa8□□□□□ -1.13
USP46-203ENST00000502443 HPSEQ9Y251 543 aa8□□□□□ -1.13
USP46-203ENST00000502443 COL6A3P12111 3177 aa8□□□□□ -1.13
USP46-203ENST00000502443 EYSQ5T1H1 3165 aa8□□□□□ -1.13
USP46-203ENST00000502443 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
USP46-203ENST00000502443 TRIP11Q15643 1979 aa7.99□□□□□ -1.13
USP46-203ENST00000502443 FRMD3A2A2Y4 597 aa7.99□□□□□ -1.13
USP46-203ENST00000502443 ABLIM1O14639 778 aa7.99□□□□□ -1.13
USP46-203ENST00000502443 TRANK1O15050 2925 aa7.99□□□□□ -1.13
USP46-203ENST00000502443 INPPL1O15357 1258 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms