RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CCHCR1Q8TD31 782 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DTX3LQ8TDB6 740 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SGIP1Q9BQI5 828 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 NHEJ1Q9H9Q4 299 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RNPEPL1Q9HAU8 725 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DAAM1Q9Y4D1 1078 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 COL4A1P02462 1669 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPEF2Q9C093 1822 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ASLP04424 464 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TFPTP0C1Z6 253 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GSTT2P0CG29 244 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GSTT2BP0CG30 244 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CALM1P0DP23 149 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CALM2P0DP24 149 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CALM3P0DP25 149 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CALB2P22676 271 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TARSP26639 723 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLCO1A2P46721 670 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 COPB1P53618 953 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 EMP3P54852 163 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 HTRA3P83110 453 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 UBXN1Q04323 297 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GFPT1Q06210 699 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 HLTFQ14527 1009 aaKnown RBP eCLIP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 KIAA0753Q2KHM9 967 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 LETM2Q2VYF4 491 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM182AQ5T1J6 154 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RASIP1Q5U651 963 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TAX1BP1Q86VP1 789 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TEX9Q8N6V9 391 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIML1Q8N9V2 468 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GATA6Q92908 595 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CEP95Q96GE4 821 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DHTKD1Q96HY7 919 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMEM47Q9BQJ4 181 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CELF4Q9BZC1 486 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 EPB41L4BQ9H329 900 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DENND2DQ9H6A0 471 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 IFT122Q9HBG6 1241 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ARNT2Q9HBZ2 717 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 HMX1Q9NP08 348 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RNF14Q9UBS8 474 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP9BO43861 1147 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ECE2O60344 883 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 E2F6O75461 281 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 GLULP15104 373 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RCVRNP35243 200 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 HSPA9P38646 679 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 MLH1P40692 756 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PPP1R2P41236 205 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PHEXP78562 749 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ITGA7Q13683 1181 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SEC23AQ15436 765 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 WDR72Q3MJ13 1102 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 KCTD21Q4G0X4 260 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 INO80DQ53TQ3 878 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PPP1R2P3Q6NXS1 205 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CAPN12Q6ZSI9 719 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 KCTD1Q719H9 257 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRMT1LQ7Z2T5 733 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 DEPDC4Q8N2C3 294 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF713Q8N859 430 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 MAELQ96JY0 434 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PBKQ96KB5 322 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 NR1H4Q96RI1 486 aaPredicted RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 NUDCD1Q96RS6 583 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 AP1M1Q9BXS5 423 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 COA1Q9GZY4 146 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RETREG1Q9H6L5 497 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PSTPIP2Q9H939 334 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 ETNK1Q9HBU6 452 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMOD2Q9NZR1 351 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 HAO1Q9UJM8 370 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 SYNPO2Q9UMS6 1093 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCDHGB4Q9UN71 923 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RABL2BQ9UNT1 228 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 RBMX2Q9Y388 322 aaKnown RBP6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCDHGB5Q9Y5G0 923 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 CENPFP49454 3210 aa6.19□□□□□ -1.42
SOX2-OT-218ENST00000498731 FAM221BA6H8Z2 402 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SNX3O60493 162 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 TJP3O95049 919 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 OAS1P00973 400 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PENKP01210 267 aaPredicted RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 AFPP02771 609 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 AKR1B1P15121 316 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 FLT1P17948 1338 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 HMGB2P26583 209 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCSK6P29122 969 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CLK2P49760 499 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 RACK1P63244 317 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAPPAQ13219 1627 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 PPP2R5BQ15173 497 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 EARS2Q5JPH6 523 aaKnown RBP6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 NT5DC1Q5TFE4 455 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 KLHDC7AQ5VTJ3 777 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 SPATA1Q5VX52 437 aa6.18□□□□□ -1.42
SOX2-OT-218ENST00000498731 CERS5Q8N5B7 392 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms