RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 SLC13A1Q9BZW2 595 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 EPC1Q9H2F5 836 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 BCO1Q9HAY6 547 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 TRHDEQ9UKU6 1024 aa6.37□□□□□ -1.39
SSR3-209ENST00000498205 WASHC2CQ9Y4E1 1318 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 GOLGA6L6A8MZA4 724 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 ITGA10O75578 1167 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 RBP3P10745 1247 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 IGBP1P78318 339 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 ZXDCQ2QGD7 858 aaPredicted RBP6.36□□□□□ -1.39
SSR3-209ENST00000498205 ZNF808Q8N4W9 903 aaPredicted RBP6.36□□□□□ -1.39
SSR3-209ENST00000498205 MDGA1Q8NFP4 955 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 RIN2Q8WYP3 895 aaPredicted RBP6.36□□□□□ -1.39
SSR3-209ENST00000498205 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 SAP30BPQ9UHR5 308 aaKnown RBP6.36□□□□□ -1.39
SSR3-209ENST00000498205 HDAC5Q9UQL6 1122 aa6.36□□□□□ -1.39
SSR3-209ENST00000498205 KLHL33A6NCF5 533 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 B5MCH6 92 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 AKR1B10O60218 316 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
SSR3-209ENST00000498205 CASRP41180 1078 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 MCAMP43121 646 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 SLC16A1P53985 500 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
SSR3-209ENST00000498205 APBA1Q02410 837 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 MGAT2Q10469 447 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 CRHR2Q13324 411 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 ABHD15Q6UXT9 468 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 PALM2Q8IXS6 379 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 CBARPQ8N350 705 aaPredicted RBP6.35□□□□□ -1.39
SSR3-209ENST00000498205 OR7D4Q8NG98 312 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 CYFIP2Q96F07 1278 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 TRIM8Q9BZR9 551 aa6.35□□□□□ -1.39
SSR3-209ENST00000498205 ARAP1Q96P48 1450 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 CENPBP07199 599 aaPredicted RBP6.34□□□□□ -1.39
SSR3-209ENST00000498205 MAN2A2P49641 1150 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 PTH1RQ03431 593 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 CDSNQ15517 529 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 CLUL1Q15846 466 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 NAIF1Q69YI7 327 aaPredicted RBP6.34□□□□□ -1.39
SSR3-209ENST00000498205 HTR3DQ70Z44 454 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
SSR3-209ENST00000498205 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
SSR3-209ENST00000498205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.33□□□□□ -1.4
SSR3-209ENST00000498205 GABRDO14764 452 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 TEX33O43247 280 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 KATNA1O75449 491 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 MYBL2P10244 700 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 OSMP13725 252 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 IL2RBP14784 551 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 MGAT1P26572 445 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 IARSP41252 1262 aaKnown RBP6.33□□□□□ -1.4
SSR3-209ENST00000498205 WASP42768 502 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 FLT3LGP49771 235 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 PER3P56645 1201 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
SSR3-209ENST00000498205 FAM50AQ14320 339 aaKnown RBP6.33□□□□□ -1.4
SSR3-209ENST00000498205 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 FUBP3Q96I24 572 aaKnown RBP eCLIP6.33□□□□□ -1.4
SSR3-209ENST00000498205 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
SSR3-209ENST00000498205 PRR5-ARHGAP8B1AHC4 643 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 PJA2O43164 708 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 PPFIA4O75335 1185 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 PEX11BO96011 259 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 CCND1P24385 295 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 CCT2P78371 535 aaKnown RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 SP140Q13342 867 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 FAM47AQ5JRC9 791 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 SPDYAQ5MJ70 313 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 SPTY2D1Q68D10 685 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 PNMA8AQ86V59 439 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 GPATCH3Q96I76 525 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 CEP89Q96ST8 783 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 CPPED1Q9BRF8 314 aaPredicted RBP6.32□□□□□ -1.4
SSR3-209ENST00000498205 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 PCDHGA2Q9Y5H1 932 aa6.32□□□□□ -1.4
SSR3-209ENST00000498205 AQRO60306 1485 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSR3-209ENST00000498205 EFCAB5A4FU69 1503 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 MT-CO1P00395 513 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 RPLP2P05387 115 aaKnown RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 USP39Q53GS9 565 aaKnown RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 MIGA2Q7L4E1 593 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 C1orf210Q8IVY1 113 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
SSR3-209ENST00000498205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms