RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, human

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCG5-208	ENST00000498069	HSCB	Q8IWL3	235 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	ADHFE1	Q8IWW8	467 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	COLGALT2	Q8IYK4	626 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	CASP10	Q92851	521 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	SNX21	Q969T3	373 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	POP1	Q99575	1024 aa	Known RBP	11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	C1QTNF1	Q9BXJ1	281 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	MRPL4	Q9BYD3	311 aa	Known RBP	11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	ZBP1	Q9H171	429 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	MRPL17	Q9NRX2	175 aa	Known RBP	11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	LARS	Q9P2J5	1176 aa	Known RBP	11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	USP20	Q9Y2K6	914 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	CLIC4	Q9Y696	253 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	CDH23	Q9H251	3354 aa		11.16	□□□□□ -0.62
SCG5-208	ENST00000498069	TTC3	P53804	2025 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	TTLL13P	A6NNM8	815 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069		H0YCG3	227 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	SLC16A4	O15374	487 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	STX6	O43752	255 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	TADA2A	O75478	443 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	KRT18	P05783	430 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	TH	P07101	528 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	PDIA4	P13667	645 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	PLS3	P13797	630 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	KLRC2	P26717	231 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	DDIT3	P35638	169 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	YARS	P54577	528 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	SLC12A3	P55017	1021 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	RBM10	P98175	930 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	CEBPZ	Q03701	1054 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	DSC1	Q08554	894 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	TMEM119	Q4V9L6	283 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	NT5DC1	Q5TFE4	455 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	ANKRD54	Q6NXT1	300 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	DAW1	Q8N136	415 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	SMRP1	Q8NCR6	262 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	SPIRE2	Q8WWL2	714 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	AUTS2	Q8WXX7	1259 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	ACO2	Q99798	780 aa	Known RBP	11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	CCDC39	Q9UFE4	941 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	TNFSF13B	Q9Y275	285 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	GDA	Q9Y2T3	454 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	HCFC2	Q9Y5Z7	792 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	IRAK3	Q9Y616	596 aa		11.15	□□□□□ -0.62
SCG5-208	ENST00000498069	SPDYE4	A6NLX3	237 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	C2CD2L	O14523	706 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	B4GALT3	O60512	393 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	SOD2	P04179	222 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	UROD	P06132	367 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	ALAD	P13716	330 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	MARCKS	P29966	332 aa	Predicted RBP	11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	TXLNA	P40222	546 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	REST	Q13127	1097 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	KCNC3	Q14003	757 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	EEF1DP3	Q658K8	133 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	CES5A	Q6NT32	575 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	FAM173B	Q6P4H8	233 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	MYCT1	Q8N699	235 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	GSTCD	Q8NEC7	633 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	VN1R2	Q8NFZ6	395 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	CCDC94	Q9BW85	323 aa	Predicted RBP	11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	APOL5	Q9BWW9	433 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	CCSER1	Q9C0I3	900 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	ZHX3	Q9H4I2	956 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	CD320	Q9NPF0	282 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	ARHGAP28	Q9P2N2	729 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	ODF2L	Q9ULJ1	636 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	MTMR6	Q9Y217	621 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	USP15	Q9Y4E8	981 aa	Predicted RBP	11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	SRPRB	Q9Y5M8	271 aa	Known RBP	11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	CHD7	Q9P2D1	2997 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	ZMYM2	Q9UBW7	1377 aa		11.14	□□□□□ -0.63
SCG5-208	ENST00000498069	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	C19orf67	A6NJJ6	358 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	RECQL4	O94761	1208 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	FAM13A	O94988	1023 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	PLCG1	P19174	1290 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	SCP2	P22307	547 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	MATR3	P43243	847 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	GRIN1	Q05586	938 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ZP2	Q05996	745 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ITIH3	Q06033	890 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	MAPK7	Q13164	816 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	TUSC3	Q13454	348 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	MCM6	Q14566	821 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	KARS	Q15046	597 aa	Known RBP	11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	PTPA	Q15257	358 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	PTPN14	Q15678	1187 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	USP41	Q3LFD5	358 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ZNF568	Q3ZCX4	644 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ARSH	Q5FYA8	562 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	SPECC1	Q5M775	1068 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	RRAGB	Q5VZM2	374 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ELMSAN1	Q6PJG2	1045 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	TAS1R1	Q7RTX1	841 aa		11.13	□□□□□ -0.63
SCG5-208	ENST00000498069	ZBTB33	Q86T24	672 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms