RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 GCNT4Q9P109 453 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
SNRNP200-208ENST00000497539 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 DCAF17Q5H9S7 520 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 SYCP3Q8IZU3 236 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 GTF3C2Q8WUA4 911 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 MS4A14Q96JA4 679 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 NIFKQ9BYG3 293 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 NLRC4Q9NPP4 1024 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 SNX12Q9UMY4 172 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 ESYT3A0FGR9 886 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 ZEB2O60315 1214 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 TGFB3P10600 412 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 FERP16591 822 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 MAGEA1P43355 309 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 SMTNP53814 917 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 NAP1L1P55209 391 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 STK33Q9BYT3 514 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 TBX20Q9UMR3 447 aa12.49□□□□□ -0.41
SNRNP200-208ENST00000497539 GRIN2DO15399 1336 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ZSCAN5CA6NGD5 496 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 TACC1O75410 805 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 KRT14P02533 472 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 HNRNPH1P31943 449 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 EPHX2P34913 555 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 NPTX2P47972 431 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 PRKCEQ02156 737 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ITIH3Q06033 890 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 DMP1Q13316 513 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 FASTKD5Q7L8L6 764 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 KSR1Q8IVT5 923 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 CCDC60Q8IWA6 550 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 XXYLT1Q8NBI6 393 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ASCC2Q9H1I8 757 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 CYP26B1Q9NR63 512 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 SALL4Q9UJQ4 1053 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 DNAJC25-GNG10A0A024R161 153 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 BUB1O43683 1085 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 EXOC3O60645 756 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 AP1G2O75843 785 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ACTN1P12814 892 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 RNASE9P60153 205 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 MYL7Q01449 175 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 KLHL30Q0D2K2 578 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 NAB2Q15742 525 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 HHATQ5VTY9 493 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 KCNV1Q6PIU1 500 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 PLEKHG4BQ96PX9 1271 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 INTS2Q9H0H0 1204 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 HSPBP1Q9NZL4 362 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 ARHGAP28Q9P2N2 729 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
SNRNP200-208ENST00000497539 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 EIF3HO15372 352 aaKnown RBP eCLIP12.47□□□□□ -0.415e-7■■□□□ 12.6
SNRNP200-208ENST00000497539 KRT13P13646 458 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 CYP2J2P51589 502 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 NPEPPSP55786 919 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 SP2Q02086 613 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 GFPT1Q06210 699 aaPredicted RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 PLS1Q14651 629 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 C1orf220Q5T0J3 134 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 CCDC70Q6NSX1 233 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 OSBPL9Q96SU4 736 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 PIGRP01833 764 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 GTF2H1P32780 548 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 STAT1P42224 750 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 PEX3P56589 373 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 APBA1Q02410 837 aa12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-208ENST00000497539 CCDC181Q5TID7 509 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms