RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 DUSP2Q05923 314 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 FSCN1Q16658 493 aaKnown RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 C19orf54Q5BKX5 351 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 DCAF17Q5H9S7 520 aaPredicted RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 RABL3Q5HYI8 236 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 METTL24Q5JXM2 366 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 IL17RAQ96F46 866 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 BBC3Q96PG8 261 aaPredicted RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 PDCD2LQ9BRP1 358 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 EPC1Q9H2F5 836 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 KCTD10Q9H3F6 313 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 TRPS1Q9UHF7 1281 aa4.65□□□□□ -1.67
VPS26A-208ENST00000497022 APOBEC2Q9Y235 224 aaKnown RBP4.65□□□□□ -1.67
VPS26A-208ENST00000497022 GRXCR1A8MXD5 290 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 DNAJC6O75061 913 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 FAM20BO75063 409 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 TMEM127O75204 238 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 SOX5P35711 763 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 MEF2AQ02078 507 aaPredicted RBP4.64□□□□□ -1.67
VPS26A-208ENST00000497022 UGT8Q16880 541 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 LY6G5CQ5SRR4 150 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 ABHD15Q6UXT9 468 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 FAM83AQ86UY5 434 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 ADGRG3Q86Y34 549 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 CHAC2Q8WUX2 184 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 SNX33Q8WV41 574 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 ACAP3Q96P50 834 aa4.64□□□□□ -1.67
VPS26A-208ENST00000497022 LSM14BQ9BX40 385 aaKnown RBP4.64□□□□□ -1.67
VPS26A-208ENST00000497022 BRINP1O60477 761 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 PRAMEF4O60810 478 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 CDK4P11802 303 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 GYPEP15421 78 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 ITGB6P18564 788 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 ENPP1P22413 925 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 CTSSP25774 331 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 KRTAP10-9P60411 292 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 APBA1Q02410 837 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 PTPAQ15257 358 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 DOK3Q7L591 496 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 CMIPQ8IY22 773 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 AFAP1L2Q8N4X5 818 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 ZNF276Q8N554 614 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 LILRA3Q8N6C8 439 aaPredicted RBP4.63□□□□□ -1.67
VPS26A-208ENST00000497022 GLB1L3Q8NCI6 653 aaPredicted RBP4.63□□□□□ -1.67
VPS26A-208ENST00000497022 OR52N2Q8NGI0 321 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 CPEB1Q9BZB8 566 aaKnown RBP4.63□□□□□ -1.67
VPS26A-208ENST00000497022 TOR3AQ9H497 397 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS26A-208ENST00000497022 FZD1Q9UP38 647 aa4.63□□□□□ -1.67
VPS26A-208ENST00000497022 GRID2IPA4D2P6 1211 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 ITGB1P05556 798 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 VPS72Q15906 364 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS26A-208ENST00000497022 STRIP1Q5VSL9 837 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 LRRC55Q6ZSA7 311 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 GPRIN1Q7Z2K8 1008 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 XYLT1Q86Y38 959 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 VRK3Q8IV63 474 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 RAX2Q96IS3 184 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 PAWRQ96IZ0 340 aaKnown RBP4.62□□□□□ -1.67
VPS26A-208ENST00000497022 CDC5LQ99459 802 aaKnown RBP4.62□□□□□ -1.67
VPS26A-208ENST00000497022 VTA1Q9NP79 307 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 DPP7Q9UHL4 492 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 EDARQ9UNE0 448 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 SORCS3Q9UPU3 1222 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 HDAC5Q9UQL6 1122 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 ZMYM3Q14202 1370 aa4.62□□□□□ -1.67
VPS26A-208ENST00000497022 GOLGA8AA7E2F4 631 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 ITGA10O75578 1167 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 CLSTN1O94985 981 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 EYA4O95677 639 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 ABHD16AO95870 558 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 GASTP01350 101 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 ERBB2P04626 1255 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 HSP90B1P14625 803 aaKnown RBP4.61□□□□□ -1.67
VPS26A-208ENST00000497022 NR4A1P22736 598 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 PTTG1IPP53801 180 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 STAT4Q14765 748 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 CT47A1Q5JQC4 288 aaPredicted RBP4.61□□□□□ -1.67
VPS26A-208ENST00000497022 IQSEC1Q6DN90 963 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 CPT1CQ8TCG5 803 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 PROKR1Q8TCW9 393 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 LMBR1Q8WVP7 490 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 MLST8Q9BVC4 326 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 HS3ST4Q9Y661 456 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 RPTORQ8N122 1335 aa4.61□□□□□ -1.67
VPS26A-208ENST00000497022 TRIM24O15164 1050 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 B3GALT2O43825 422 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 RECQL4O94761 1208 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 SCAF4O95104 1147 aaKnown RBP4.6□□□□□ -1.67
VPS26A-208ENST00000497022 VIL1P09327 827 aaKnown RBP4.6□□□□□ -1.67
VPS26A-208ENST00000497022 ZNF37AP17032 561 aaPredicted RBP4.6□□□□□ -1.67
VPS26A-208ENST00000497022 MRPS9P82933 396 aaKnown RBP4.6□□□□□ -1.67
VPS26A-208ENST00000497022 CDK17Q00537 523 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 TAP1Q03518 808 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 BHLHA9Q7RTU4 235 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 KRT26Q7Z3Y9 468 aa4.6□□□□□ -1.67
VPS26A-208ENST00000497022 TGFBRAP1Q8WUH2 860 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms