RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MKS1Q9NXB0 559 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 TRPS1Q9UHF7 1281 aa6.56□□□□□ -1.36
SNX13-211ENST00000496855 GABRDO14764 452 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 MT-CO1P00395 513 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 MCAMP43121 646 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 CNGB1Q14028 1251 aaPredicted RBP6.55□□□□□ -1.36
SNX13-211ENST00000496855 DCAF17Q5H9S7 520 aaPredicted RBP6.55□□□□□ -1.36
SNX13-211ENST00000496855 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 Q6ZVL8 140 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 HTR3DQ70Z44 454 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 DOK3Q7L591 496 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 FAM83AQ86UY5 434 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 TMPRSS6Q8IU80 811 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 MDM1Q8TC05 714 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 ADI1Q9BV57 179 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 LSM14BQ9BX40 385 aaKnown RBP6.55□□□□□ -1.36
SNX13-211ENST00000496855 PCDHGA2Q9Y5H1 932 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 ZMYM3Q14202 1370 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 WASHC2CQ9Y4E1 1318 aa6.55□□□□□ -1.36
SNX13-211ENST00000496855 KLRG2A4D1S0 409 aaPredicted RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 ADCY6O43306 1168 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 AMHP03971 560 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 MYBL2P10244 700 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 RBP3P10745 1247 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 GSPT1P15170 499 aaKnown RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 IBSPP21815 317 aaPredicted RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 ECHS1P30084 290 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 PDZD4Q76G19 769 aaPredicted RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 OR7D4Q8NG98 312 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 HOXB13Q92826 284 aaPredicted RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 FAXDC2Q96IV6 333 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 MNTQ99583 582 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 ZNF703Q9H7S9 590 aaPredicted RBP6.54□□□□□ -1.36
SNX13-211ENST00000496855 BCO1Q9HAY6 547 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 HDAC5Q9UQL6 1122 aa6.54□□□□□ -1.36
SNX13-211ENST00000496855 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 MARCH6O60337 910 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 HK1P19367 917 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 FOXE3Q13461 319 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 PRAMEF14Q5SWL7 426 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 NAIF1Q69YI7 327 aaPredicted RBP6.53□□□□□ -1.36
SNX13-211ENST00000496855 XYLT1Q86Y38 959 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 OR52N2Q8NGI0 321 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 PGBD4Q96DM1 585 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 CPEB1Q9BZB8 566 aaKnown RBP6.53□□□□□ -1.36
SNX13-211ENST00000496855 VPS11Q9H270 941 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 CEP72Q9P209 647 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 NOP58Q9Y2X3 529 aaKnown RBP6.53□□□□□ -1.36
SNX13-211ENST00000496855 XDHP47989 1333 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 FZD9O00144 591 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 MGAT2Q10469 447 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 TRMT2AQ8IZ69 625 aaKnown RBP6.53□□□□□ -1.36
SNX13-211ENST00000496855 REPS2Q8NFH8 660 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 JADE3Q92613 823 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 CEP95Q96GE4 821 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 FUBP3Q96I24 572 aaKnown RBP eCLIP6.53□□□□□ -1.36
SNX13-211ENST00000496855 DNM3Q9UQ16 869 aa6.53□□□□□ -1.36
SNX13-211ENST00000496855 KLHL33A6NCF5 533 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 B5MCH6 92 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA12O60330 932 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 C1SP09871 688 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PTPN7P35236 360 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 SREBF1P36956 1147 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 FLT3LGP49771 235 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 KRT85P78386 507 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 ACAP2Q15057 778 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 MFSD14BQ5SR56 506 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 CRIP3Q6Q6R5 217 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 GPRIN1Q7Z2K8 1008 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PPM1NQ8N819 430 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
SNX13-211ENST00000496855 CACTINQ8WUQ7 758 aaKnown RBP6.52□□□□□ -1.37
SNX13-211ENST00000496855 PLEKHG4BQ96PX9 1271 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 HOMER2Q9NSB8 354 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PARPBPQ9NWS1 579 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA9Q9Y5G4 932 aaKnown RBP6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA8Q9Y5G5 932 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA7Q9Y5G6 932 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA6Q9Y5G7 932 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PCDHGA3Q9Y5H0 932 aa6.52□□□□□ -1.37
SNX13-211ENST00000496855 PRR5-ARHGAP8B1AHC4 643 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 ENDOD1O94919 500 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 PER3P56645 1201 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 DGCR2P98153 550 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 PTH1RQ03431 593 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 SEPT2Q15019 361 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 PCBP2Q15366 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNX13-211ENST00000496855 VPS72Q15906 364 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 FAM47AQ5JRC9 791 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 ANKS6Q68DC2 871 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
SNX13-211ENST00000496855 PQLC1Q8N2U9 271 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 UHRF1Q96T88 793 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms