RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GUCY2FP51841 1108 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 MALLQ13021 153 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 TOB2Q14106 344 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-212ENST00000496458 FAM50AQ14320 339 aaKnown RBP7.73□□□□□ -1.17
SF3B1-212ENST00000496458 CLUL1Q15846 466 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 DOK3Q7L591 496 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 OR52N2Q8NGI0 321 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 SLC2A13Q96QE2 648 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 MENTQ9BUN1 341 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 GPR45Q9Y5Y3 372 aa7.73□□□□□ -1.17
SF3B1-212ENST00000496458 FAM20BO75063 409 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 ZNF202O95125 648 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 ECHS1P30084 290 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 TUBA3CQ13748 450 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 NAIF1Q69YI7 327 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-212ENST00000496458 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 TUBA3EQ6PEY2 450 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 FAM180AQ6UWF9 173 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 Q6ZVL8 140 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 PDZD4Q76G19 769 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-212ENST00000496458 PRPF38AQ8NAV1 312 aaKnown RBP7.72□□□□□ -1.17
SF3B1-212ENST00000496458 REPS2Q8NFH8 660 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 FBXO18Q8NFZ0 1043 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 CEP95Q96GE4 821 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 ADI1Q9BV57 179 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 SCAND2PQ9GZW5 306 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-212ENST00000496458 RBM12Q9NTZ6 932 aaKnown RBP7.72□□□□□ -1.17
SF3B1-212ENST00000496458 PCDHGA2Q9Y5H1 932 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 HS3ST3A1Q9Y663 406 aa7.72□□□□□ -1.17
SF3B1-212ENST00000496458 PRR5-ARHGAP8B1AHC4 643 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 MT-CO1P00395 513 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 AGXTP21549 392 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 PTPN7P35236 360 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 GDF5P43026 501 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 EVA1CP58658 441 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 SLC25A3Q00325 362 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 PPP3CAQ08209 521 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 MTMR1Q13613 665 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 NOMO1Q15155 1222 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 VPS72Q15906 364 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 MFSD14BQ5SR56 506 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 ANKS6Q68DC2 871 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 TRMT2AQ8IZ69 625 aaKnown RBP7.71□□□□□ -1.18
SF3B1-212ENST00000496458 CBARPQ8N350 705 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-212ENST00000496458 SLC16A11Q8NCK7 471 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 OR7D4Q8NG98 312 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 MTMR8Q96EF0 704 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 UHRF1Q96T88 793 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-212ENST00000496458 SPON1Q9HCB6 807 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 TRHDEQ9UKU6 1024 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 SORCS3Q9UPU3 1222 aa7.71□□□□□ -1.18
SF3B1-212ENST00000496458 B5MCH6 92 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 KATNA1O75449 491 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 MCAMP43121 646 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 PER3P56645 1201 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 ITKQ08881 620 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 ABCB5Q2M3G0 1257 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 RABL3Q5HYI8 236 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 METTL24Q5JXM2 366 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 PGM2L1Q6PCE3 622 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 USP51Q70EK9 711 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 CCDC8Q9H0W5 538 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-212ENST00000496458 BCO1Q9HAY6 547 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-212ENST00000496458 DNM3Q9UQ16 869 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 COL4A3BPQ9Y5P4 624 aa7.7□□□□□ -1.18
SF3B1-212ENST00000496458 TRIM75PA6NK02 468 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 GRXCR1A8MXD5 290 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 NARSO43776 548 aaKnown RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 AKAP8O43823 692 aaKnown RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 FLT3LGP49771 235 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 INAVAQ3KP66 663 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 GJC2Q5T442 439 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 SYDE2Q5VT97 1194 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 GPRIN1Q7Z2K8 1008 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 PQLC1Q8N2U9 271 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 PCDH12Q9NPG4 1184 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 SLC2A4RGQ9NR83 387 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 MKS1Q9NXB0 559 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 SRRDQ9UH36 339 aa7.69□□□□□ -1.18
SF3B1-212ENST00000496458 EIF2B4Q9UI10 523 aaKnown RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 REXO2Q9Y3B8 237 aaKnown RBP7.69□□□□□ -1.18
SF3B1-212ENST00000496458 RPS6KA4O75676 772 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 MYBL2P10244 700 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 SREBF1P36956 1147 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 CSRP2Q16527 193 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 FNDC7Q5VTL7 733 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 PPM1NQ8N819 430 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 RNF169Q8NCN4 708 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 CPT1CQ8TCG5 803 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 TFAP2CQ92754 450 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 HOXB13Q92826 284 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-212ENST00000496458 CLCA2Q9UQC9 943 aa7.68□□□□□ -1.18
SF3B1-212ENST00000496458 TBKBP1A7MCY6 615 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 SCAF4O95104 1147 aaKnown RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 APOBEC3AP31941 199 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 ACVRL1P37023 503 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms