RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 SLC39A14Q15043 492 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 PTCRAQ6ISU1 281 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 DDX53Q86TM3 631 aaKnown RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 KRI1Q8N9T8 703 aaKnown RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 RAD54LQ92698 747 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 NTPCRQ9BSD7 190 aaKnown RBP19.4■□□□□ 0.7
HDAC4-211ENST00000494800 TNFSF13BQ9Y275 285 aa19.4■□□□□ 0.7
HDAC4-211ENST00000494800 SFI1A8K8P3 1242 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 SLC16A4O15374 487 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 OR1G1P47890 313 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 AFF1P51825 1210 aaKnown RBP19.39■□□□□ 0.69
HDAC4-211ENST00000494800 GRIK3Q13003 919 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 VPS52Q8N1B4 723 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 TCHPQ9BT92 498 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 PCDHGC5Q9Y5F6 944 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 PLXNA4Q9HCM2 1894 aa19.39■□□□□ 0.69
HDAC4-211ENST00000494800 TTLL13PA6NNM8 815 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 NRP1O14786 923 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 PER2O15055 1255 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 TBCAO75347 108 aaKnown RBP19.38■□□□□ 0.69
HDAC4-211ENST00000494800 FAM13AO94988 1023 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-211ENST00000494800 ABCD1P33897 745 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 GTF2F1P35269 517 aaKnown RBP eCLIP19.38■□□□□ 0.691e-20■■■■□ 21.3
HDAC4-211ENST00000494800 DDIT3P35638 169 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-211ENST00000494800 DUSP6Q16828 381 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 SPECC1Q5M775 1068 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 NT5DC1Q5TFE4 455 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 RRAGBQ5VZM2 374 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 COLGALT2Q8IYK4 626 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 MRPL43Q8N983 215 aaKnown RBP19.38■□□□□ 0.69
HDAC4-211ENST00000494800 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-211ENST00000494800 EPSTI1Q96J88 318 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 COLEC11Q9BWP8 271 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 BLOC1S4Q9NUP1 217 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 SNTG2Q9NY99 539 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 KLK14Q9P0G3 267 aa19.38■□□□□ 0.69
HDAC4-211ENST00000494800 TNFRSF10AO00220 468 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 LINC01565O15544 149 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 CXCL14O95715 111 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 LTBRP36941 435 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 YARSP54577 528 aaKnown RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 DSC1Q08554 894 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 MCM6Q14566 821 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 ZNF568Q3ZCX4 644 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 ARSHQ5FYA8 562 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 CCDC73Q6ZRK6 1079 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 TMEM173Q86WV6 379 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 MYCT1Q8N699 235 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 SPRYD3Q8NCJ5 442 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 CLIC6Q96NY7 704 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 ACO2Q99798 780 aaKnown RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 REEP2Q9BRK0 252 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 CCDC94Q9BW85 323 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 ZBP1Q9H171 429 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 ZHX3Q9H4I2 956 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 PARVGQ9HBI0 331 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 TOPORSQ9NS56 1045 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 CD207Q9UJ71 328 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 SSX2IPQ9Y2D8 614 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 USP20Q9Y2K6 914 aa19.37■□□□□ 0.69
HDAC4-211ENST00000494800 PRG3Q9Y2Y8 225 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-211ENST00000494800 NPHP3-ACAD11A0A0J9YXS1 232 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-211ENST00000494800 GRXCR2A6NFK2 248 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 HIDE1A8MVS5 230 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 SPTLC2O15270 562 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 TBX10O75333 385 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 RECQL4O94761 1208 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 THP07101 528 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 CTSAP10619 480 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 CACNB1Q02641 598 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-211ENST00000494800 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-211ENST00000494800 EEF1DP3Q658K8 133 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 TMEM161BQ8NDZ6 487 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
HDAC4-211ENST00000494800 GDAQ9Y2T3 454 aa19.36■□□□□ 0.69
HDAC4-211ENST00000494800 C2orf71A6NGG8 1288 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 B4GALT3O60512 393 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 PPP6R2O75170 966 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 YEATS4O95619 227 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 F13A1P00488 732 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 EDN1P05305 212 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 MAPTP10636 758 aaKnown RBP19.35■□□□□ 0.69
HDAC4-211ENST00000494800 MCF2P10911 925 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 TUSC3Q13454 348 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 SMAD4Q13485 552 aaKnown RBP19.35■□□□□ 0.69
HDAC4-211ENST00000494800 CLUL1Q15846 466 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 ATL3Q6DD88 541 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 MPZL3Q6UWV2 235 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 SV2BQ7L1I2 683 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 BICD1Q96G01 975 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 TARS2Q9BW92 718 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms