RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IL17AQ16552 155 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 EEF1DP3Q658K8 133 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 SLC27A1Q6PCB7 646 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 TMC5Q6UXY8 1006 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 FZD8Q9H461 694 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 SH2B1Q9NRF2 756 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-208ENST00000494728 FAN1Q9Y2M0 1017 aa12.9□□□□□ -0.34
VTI1A-208ENST00000494728 PTGESO14684 152 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 SOD2P04179 222 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 ASGR2P07307 311 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 MYBP10242 640 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 IGFBP6P24592 240 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 ITIH3Q06033 890 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 IER5LQ5T953 404 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 FAM193BQ96PV7 902 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-208ENST00000494728 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 KANSL3Q9P2N6 904 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
VTI1A-208ENST00000494728 MYH15Q9Y2K3 1946 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 TEX28O15482 410 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
VTI1A-208ENST00000494728 ALDH2P05091 517 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 URODP06132 367 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 CYP11B2P19099 503 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 CDC25AP30304 524 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
VTI1A-208ENST00000494728 TRAPPC10P48553 1259 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
VTI1A-208ENST00000494728 SIGLEC14Q08ET2 396 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 PTGDRQ13258 359 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 NAB2Q15742 525 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 FAM187BQ17R55 369 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 KIAA0319Q5VV43 1072 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 CES5AQ6NT32 575 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 DAW1Q8N136 415 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 PRSS33Q8NF86 280 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 RPS6KC1Q96S38 1066 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 UBN1Q9NPG3 1134 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
VTI1A-208ENST00000494728 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 ANK1P16157 1881 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 CARNS1A5YM72 827 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 E9PMD0 336 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 N4BP1O75113 896 aaKnown RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 RFPL2O75678 378 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 RECQL4O94761 1208 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 BRD1O95696 1058 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 PRKCBP05771 671 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 LIG1P18858 919 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 KLRC2P26717 231 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 MTHFRP42898 656 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 GLUD2P49448 558 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 DSG1Q02413 1049 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 NHLH1Q02575 133 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 GRIK3Q13003 919 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 MAPK7Q13164 816 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 GNL2Q13823 731 aaKnown RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 GIT2Q14161 759 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 BMP8AQ7Z5Y6 402 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 CABP7Q86V35 215 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 KREMEN2Q8NCW0 462 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 SFXN1Q9H9B4 322 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 MRPL17Q9NRX2 175 aaKnown RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 PRMT7Q9NVM4 692 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-208ENST00000494728 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 PARP2Q9UGN5 583 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
VTI1A-208ENST00000494728 ZNF292O60281 2723 aa12.86□□□□□ -0.35
VTI1A-208ENST00000494728 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
VTI1A-208ENST00000494728 KIF4AO95239 1232 aa12.86□□□□□ -0.35
VTI1A-208ENST00000494728 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms