RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 GLG1Q92896 1179 aa11.51□□□□□ -0.57
PRPF4B-209ENST00000494674 BICD1Q96G01 975 aa11.51□□□□□ -0.57
PRPF4B-209ENST00000494674 ZBTB45Q96K62 511 aaPredicted RBP11.51□□□□□ -0.57
PRPF4B-209ENST00000494674 ALS2CR12Q96Q35 445 aa11.51□□□□□ -0.57
PRPF4B-209ENST00000494674 UBE2TQ9NPD8 197 aaPredicted RBP11.51□□□□□ -0.57
PRPF4B-209ENST00000494674 A0A0B4J269 797 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CTAGE15A4D2H0 777 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 K7ERI5 159 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 NCK2O43639 380 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 FAM189A1O60320 539 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CTAGE8P0CG41 777 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CETN1Q12798 172 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 STRN3Q13033 797 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 PSMD6Q15008 389 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 ZBTB41Q5SVQ8 909 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 GJC2Q5T442 439 aaPredicted RBP11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 NFRKBQ6P4R8 1299 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 ZNF572Q7Z3I7 529 aaPredicted RBP11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CTAGE6Q86UF2 777 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 FMNL3Q8IVF7 1028 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 CTAGE4Q8IX94 777 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 FAM71AQ8IYT1 594 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 SHC3Q92529 594 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 VTI1AQ96AJ9 217 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 TARS2Q9BW92 718 aaKnown RBP11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 RRAGCQ9HB90 399 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 INTUQ9ULD6 942 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 PTPRJQ12913 1337 aa11.5□□□□□ -0.57
PRPF4B-209ENST00000494674 NCANO14594 1321 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ABLIM1O14639 778 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 KIAA0391O15091 583 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 MSCO60682 206 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 PALMO75781 387 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 SNAI1O95863 264 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 SLC26A2P50443 739 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 LAMTOR4Q0VGL1 99 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 GRB14Q14449 540 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 IER5Q5VY09 327 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 CST9Q5W186 159 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 VPS36Q86VN1 386 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 LRRC71Q8N4P6 559 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 LRRC57Q8N9N7 239 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 U2AF1L4Q8WU68 220 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 SLC20A1Q8WUM9 679 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 TRAPPC12Q8WVT3 735 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 CAPZA3Q96KX2 299 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 PARD6BQ9BYG5 372 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 KIAA1586Q9HCI6 787 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 NOCTQ9UK39 431 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 AGO2Q9UKV8 859 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 A0A0A6YYK5 440 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 STRNO43815 780 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ZRANB2O95218 330 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 H2AFZP0C0S5 128 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 DLATP10515 647 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ACOT2P49753 483 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 GALCP54803 685 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ZACNQ401N2 412 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 MEI1Q5TIA1 1274 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 ZPBP2Q6X784 338 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 H2AFVQ71UI9 128 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 C2orf69Q8N8R5 385 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 PNKPQ96T60 521 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 PARK7Q99497 189 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 RAB21Q9UL25 225 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 KAT6AQ92794 2004 aa11.49□□□□□ -0.57
PRPF4B-209ENST00000494674 CNTNAP2Q9UHC6 1331 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 C22orf31O95567 290 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 C4BPAP04003 597 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 LGALS2P05162 132 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 CCDC172P0C7W6 258 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 CHRNB2P17787 502 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 EFNA5P52803 228 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 TUBB4BP68371 445 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 CKAP4Q07065 602 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 LAMC2Q13753 1193 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 SLFN12LQ6IEE8 588 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 USP37Q86T82 979 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms