RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PGBD4Q96DM1 585 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 FUCA2Q9BTY2 467 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
LSM2-214ENST00000493387 CDT1Q9H211 546 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 ELAC1Q9H777 363 aaKnown RBP12.62□□□□□ -0.39
LSM2-214ENST00000493387 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 AGO2Q9UKV8 859 aaKnown RBP12.62□□□□□ -0.39
LSM2-214ENST00000493387 CTNND2Q9UQB3 1225 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 PCDHB2Q9Y5E7 798 aa12.62□□□□□ -0.39
LSM2-214ENST00000493387 SIP14410 1827 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 C9IYK1 514 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ABLIM1O14639 778 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 CETN3O15182 167 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 EXTL3O43909 919 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 MGEA5O60502 916 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 NPTXRO95502 500 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 NR3C1P04150 777 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 CLTAP09496 248 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ACRP10323 421 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ADSSP30520 456 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 GRM5P41594 1212 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ZNF445P59923 1031 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 UBXN11Q5T124 520 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 MRPL10Q7Z7H8 261 aaKnown RBP12.61□□□□□ -0.39
LSM2-214ENST00000493387 ZBTB33Q86T24 672 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
LSM2-214ENST00000493387 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 HERVK_113Q902F9 699 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 VWCEQ96DN2 955 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
LSM2-214ENST00000493387 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
LSM2-214ENST00000493387 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 FRMD4BQ9Y2L6 1034 aa12.61□□□□□ -0.39
LSM2-214ENST00000493387 CLIC2O15247 247 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 MAPK13O15264 365 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 HOXA2O43364 376 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 EXOC3O60645 756 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 AMHP03971 560 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 NR2F2P24468 414 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 KCNJ6P48051 423 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 YARSP54577 528 aaKnown RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 MLLT1Q03111 559 aaPredicted RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 ADAM9Q13443 819 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 TTI2Q6NXR4 508 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 CDR2LQ86X02 465 aaPredicted RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 ENOX1Q8TC92 643 aaKnown RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 CBWD1Q9BRT8 395 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 EIF2AQ9BY44 585 aaKnown RBP12.6□□□□□ -0.39
LSM2-214ENST00000493387 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 IPPQ9Y573 584 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
LSM2-214ENST00000493387 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 SMTNL1A8MU46 457 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 TISP43B9A030 160 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 H0YGN5 161 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 GNA14O95837 355 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 HARSP12081 509 aaKnown RBP12.59□□□□□ -0.39
LSM2-214ENST00000493387 ITGA4P13612 1032 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 CYP2J2P51589 502 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 STX17P56962 302 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 SPATA1Q5VX52 437 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 FILIP1Q7Z7B0 1213 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 USP37Q86T82 979 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 CD302Q8IX05 232 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
LSM2-214ENST00000493387 THNSL1Q8IYQ7 743 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
LSM2-214ENST00000493387 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms