RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.13□□□□□ -1.435e-7■□□□□ 8.4
SEC13-219ENST00000492602 MARCH5Q9NX47 278 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 GDE1Q9NZC3 331 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 DNMT3BQ9UBC3 853 aaKnown RBP6.13□□□□□ -1.43
SEC13-219ENST00000492602 KCNH3Q9ULD8 1083 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 SLC8A2Q9UPR5 921 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 AKT3Q9Y243 479 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 STK24Q9Y6E0 443 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 FRMPD4Q14CM0 1322 aa6.13□□□□□ -1.43
SEC13-219ENST00000492602 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 SLC38A8A6NNN8 435 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 B8ZZF3 427 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 ZNF263O14978 683 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 ZBTB5O15062 677 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 HBP1O60381 514 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 POMCP01189 267 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 PARP1P09874 1014 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 PSMC3P17980 439 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 FCARP24071 287 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 AFF1P51825 1210 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 MTMR1Q13613 665 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 KARSQ15046 597 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 TAF1BQ53T94 588 aaPredicted RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 TRIM61Q5EBN2 209 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 TWF2Q6IBS0 349 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 PKN3Q6P5Z2 889 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 C1orf228Q6PIY5 440 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 POTEHQ6S545 545 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 CYP2U1Q7Z449 544 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 HOMER1Q86YM7 354 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 FTSJ3Q8IY81 847 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 RNF168Q8IYW5 571 aaPredicted RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 PANK1Q8TE04 598 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 PIGKQ92643 395 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 GPRASP2Q96D09 838 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 MSANTD3Q96H12 275 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 MBOAT7Q96N66 472 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 SCLT1Q96NL6 688 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 APOL6Q9BWW8 343 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 NUSAP1Q9BXS6 441 aaKnown RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 KAT14Q9H8E8 782 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 JPH1Q9HDC5 661 aaPredicted RBP6.12□□□□□ -1.43
SEC13-219ENST00000492602 CHST12Q9NRB3 414 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 CHST7Q9NS84 486 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 FNIP2Q9P278 1114 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 DKK4Q9UBT3 224 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 SLC9A2Q9UBY0 812 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 ANAPC4Q9UJX5 808 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 FBXW11Q9UKB1 542 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 PCDHB15Q9Y5E8 787 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 COL12A1Q99715 3063 aa6.12□□□□□ -1.43
SEC13-219ENST00000492602 COL1A2P08123 1366 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ZMYM2Q9UBW7 1377 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 UPK3BL1B0FP48 263 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 UPK3BL2E5RIL1 263 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 NRG2O14511 850 aaPredicted RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 SLC28A2O43868 658 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CSDE1O75534 798 aaKnown RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 C22orf31O95567 290 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 FTH1P19P0C7X4 201 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 SKIP12755 728 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CEBPBP17676 345 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ENGP17813 658 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ITGB5P18084 799 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 HOXA9P31269 272 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 SLC26A2P50443 739 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CSRP3P50461 194 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CLCN3P51790 818 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ATXN3P54252 364 aaPredicted RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 ACTR2P61160 394 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CCINQ13939 588 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 HNRNPDQ14103 355 aaKnown RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 PON2Q15165 354 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 TRIP6Q15654 476 aaKnown RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 SLC5A9Q2M3M2 681 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 USP41Q3LFD5 358 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 FAM78AQ5JUQ0 283 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ZNF484Q5JVG2 852 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 PCSK4Q6UW60 755 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 VITQ6UXI7 678 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 TRMT1LQ7Z2T5 733 aaKnown RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 KRT25Q7Z3Z0 450 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 DGKHQ86XP1 1220 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 SYNPOQ8N3V7 929 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 CAMKK1Q8N5S9 505 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 TTC8Q8TAM2 541 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 SMARCC2Q8TAQ2 1214 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 SLC7A14Q8TBB6 771 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 PGBD4Q96DM1 585 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 MAP7D2Q96T17 732 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 C8orf33Q9H7E9 229 aaPredicted RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 KANSL3Q9P2N6 904 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 MBD1Q9UIS9 605 aaPredicted RBP6.11□□□□□ -1.43
SEC13-219ENST00000492602 DNMT3LQ9UJW3 386 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 INVSQ9Y283 1065 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 PCDHB9Q9Y5E1 797 aa6.11□□□□□ -1.43
SEC13-219ENST00000492602 PTPRQQ9UMZ3 2332 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms