RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 HYIQ5T013 277 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 C1orf186Q6ZWK4 172 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 BRAPQ7Z569 592 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 DDX53Q86TM3 631 aaKnown RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 COLGALT2Q8IYK4 626 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 GJD3Q8N144 294 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 KCNH6Q9H252 994 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 CDH22Q9UJ99 828 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 PRG3Q9Y2Y8 225 aaPredicted RBP13.01□□□□□ -0.33
MDC1-207ENST00000492462 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
MDC1-207ENST00000492462 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
MDC1-207ENST00000492462 CCDC169A6NNP5 214 aa13□□□□□ -0.33
MDC1-207ENST00000492462 ACKR2O00590 384 aa13□□□□□ -0.33
MDC1-207ENST00000492462 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
MDC1-207ENST00000492462 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
MDC1-207ENST00000492462 CA8P35219 290 aa13□□□□□ -0.33
MDC1-207ENST00000492462 NPTX2P47972 431 aa13□□□□□ -0.33
MDC1-207ENST00000492462 DSC1Q08554 894 aa13□□□□□ -0.33
MDC1-207ENST00000492462 COASYQ13057 564 aa13□□□□□ -0.33
MDC1-207ENST00000492462 PPP2R5AQ15172 486 aa13□□□□□ -0.33
MDC1-207ENST00000492462 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
MDC1-207ENST00000492462 ARL6IP4Q66PJ3 421 aaKnown RBP13□□□□□ -0.33
MDC1-207ENST00000492462 SYCE2Q6PIF2 218 aa13□□□□□ -0.33
MDC1-207ENST00000492462 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
MDC1-207ENST00000492462 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
MDC1-207ENST00000492462 CABP7Q86V35 215 aa13□□□□□ -0.33
MDC1-207ENST00000492462 SMRP1Q8NCR6 262 aa13□□□□□ -0.33
MDC1-207ENST00000492462 RABGGTAQ92696 567 aa13□□□□□ -0.33
MDC1-207ENST00000492462 IFT74Q96LB3 600 aa13□□□□□ -0.33
MDC1-207ENST00000492462 FAM193BQ96PV7 902 aaPredicted RBP13□□□□□ -0.33
MDC1-207ENST00000492462 TMEM175Q9BSA9 504 aa13□□□□□ -0.33
MDC1-207ENST00000492462 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
MDC1-207ENST00000492462 SNTG2Q9NY99 539 aa13□□□□□ -0.33
MDC1-207ENST00000492462 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
MDC1-207ENST00000492462 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
MDC1-207ENST00000492462 USP15Q9Y4E8 981 aaPredicted RBP13□□□□□ -0.33
MDC1-207ENST00000492462 HCFC2Q9Y5Z7 792 aa13□□□□□ -0.33
MDC1-207ENST00000492462 CLIC4Q9Y696 253 aa13□□□□□ -0.33
MDC1-207ENST00000492462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.99□□□□□ -0.33
MDC1-207ENST00000492462 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 K7ELQ4 463 aaPredicted RBP12.99□□□□□ -0.33
MDC1-207ENST00000492462 N4BP3O15049 544 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 ALDH2P05091 517 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 CTSAP10619 480 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 OR1G1P47890 313 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
MDC1-207ENST00000492462 PTPAQ15257 358 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
MDC1-207ENST00000492462 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 CDCA3Q99618 268 aaPredicted RBP12.99□□□□□ -0.33
MDC1-207ENST00000492462 PAAF1Q9BRP4 392 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 MTMR6Q9Y217 621 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 TRIOO75962 3097 aa12.99□□□□□ -0.33
MDC1-207ENST00000492462 PTGESO14684 152 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 SLC16A4O15374 487 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 RECQL4O94761 1208 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 EFEMP2O95967 443 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 EPCAMP16422 314 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 PDCP20941 246 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 EFNA5P52803 228 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
MDC1-207ENST00000492462 DHX8Q14562 1220 aaKnown RBP12.98□□□□□ -0.33
MDC1-207ENST00000492462 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
MDC1-207ENST00000492462 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 ATF7IP2Q5U623 682 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 KANK3Q6NY19 840 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 TMEM184AQ6ZMB5 413 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 USP49Q70CQ1 688 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 CEP120Q8N960 986 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
MDC1-207ENST00000492462 CDK5RAP3Q96JB5 506 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 S1PR5Q9H228 398 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 ARHGAP28Q9P2N2 729 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 FAM50BQ9Y247 325 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
MDC1-207ENST00000492462 K7ERI5 159 aa12.97□□□□□ -0.33
MDC1-207ENST00000492462 LILRB3O75022 631 aa12.97□□□□□ -0.33
MDC1-207ENST00000492462 IGFBP6P24592 240 aaPredicted RBP12.97□□□□□ -0.33
MDC1-207ENST00000492462 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
MDC1-207ENST00000492462 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
MDC1-207ENST00000492462 UBA7P41226 1012 aa12.97□□□□□ -0.33
MDC1-207ENST00000492462 GRIK3Q13003 919 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms