RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ECM1Q16610 540 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 MAPK6Q16659 721 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 FAM187BQ17R55 369 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 RARS2Q5T160 578 aaKnown RBP9.13□□□□□ -0.95
LSM2-213ENST00000491421 KRT79Q5XKE5 535 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 DTHD1Q6ZMT9 781 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 PPFIBP1Q86W92 1011 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 IGSF22Q8N9C0 903 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 KIFAP3Q92845 792 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 IFT74Q96LB3 600 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 NECTIN4Q96NY8 510 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 RPS6KC1Q96S38 1066 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 HERC2P3Q9BVR0 1158 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 FZD8Q9H461 694 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 MRPL17Q9NRX2 175 aaKnown RBP9.13□□□□□ -0.95
LSM2-213ENST00000491421 DDX19AQ9NUU7 478 aaKnown RBP9.13□□□□□ -0.95
LSM2-213ENST00000491421 MARCH5Q9NX47 278 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 CDH22Q9UJ99 828 aa9.13□□□□□ -0.95
LSM2-213ENST00000491421 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 TTLL13PA6NNM8 815 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 PP2D1A8MPX8 630 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 H3BQV1 296 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 ACKR2O00590 384 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 C2CD2LO14523 706 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
LSM2-213ENST00000491421 CNPP09543 421 aaKnown RBP9.12□□□□□ -0.95
LSM2-213ENST00000491421 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 SP100P23497 879 aaPredicted RBP9.12□□□□□ -0.95
LSM2-213ENST00000491421 KLRC2P26717 231 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 GJB2P29033 226 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 MTHFRP42898 656 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 GLUD2P49448 558 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 MCM2P49736 904 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 EFNA5P52803 228 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 GRIK3Q13003 919 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 RILPL1Q5EBL4 403 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 CABP7Q86V35 215 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 C12orf76Q8N812 135 aaPredicted RBP9.12□□□□□ -0.95
LSM2-213ENST00000491421 SLC22A17Q8WUG5 538 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 EDAQ92838 391 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 FAM122AQ96E09 287 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 FBXL18Q96ME1 805 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 RIPOR3Q96MK2 946 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 KLHL5Q96PQ7 755 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 POMKQ9H5K3 350 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.12□□□□□ -0.95
LSM2-213ENST00000491421 MIOSQ9NXC5 875 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 KLK14Q9P0G3 267 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 DNM3Q9UQ16 869 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 SSX2IPQ9Y2D8 614 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 NR2E1Q9Y466 385 aa9.12□□□□□ -0.95
LSM2-213ENST00000491421 E9PMD0 336 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 F8W810 466 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 LILRB3O75022 631 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 ADH1AP07327 375 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 CDC25AP30304 524 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 PLA2G5P39877 138 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 CLCN4P51793 760 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 ATP2C1P98194 919 aaPredicted RBP9.11□□□□□ -0.95
LSM2-213ENST00000491421 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
LSM2-213ENST00000491421 IL17AQ16552 155 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 DCAF4L1Q3SXM0 396 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 ATAT1Q5SQI0 421 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 KIAA1841Q6NSI8 718 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 TMC5Q6UXY8 1006 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 HFE2Q6ZVN8 426 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 TAS1R1Q7RTX1 841 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 ZBTB33Q86T24 672 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 GSTCDQ8NEC7 633 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 TBC1D32Q96NH3 1257 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 SFXN1Q9H9B4 322 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 POLD4Q9HCU8 107 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 SNTG2Q9NY99 539 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 SMC3Q9UQE7 1217 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
LSM2-213ENST00000491421 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.11□□□□□ -0.95
LSM2-213ENST00000491421 TRIOO75962 3097 aa9.11□□□□□ -0.95
LSM2-213ENST00000491421 CASTOR2A6NHX0 329 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 CCDC169A6NNP5 214 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 K7ERI5 159 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 TEX28O15482 410 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 HIP1RO75146 1068 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 RECQL4O94761 1208 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 EFEMP2O95967 443 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 EDN1P05305 212 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 PEX3P56589 373 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 ZXDAP98168 799 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 DSG1Q02413 1049 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 DMP1Q13316 513 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms