RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FAM13AO94988 1023 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 CYP27A1Q02318 531 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 KSR1Q8IVT5 923 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 MYCT1Q8N699 235 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 METTL13Q8N6R0 699 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 ARRDC4Q8NCT1 418 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 CAGE1Q8TC20 777 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 ASAP3Q8TDY4 903 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 SECISBP2LQ93073 1101 aaKnown RBP24.74■■□□□ 1.55
USF3-203ENST00000491165 CRISPLD2Q9H0B8 497 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 MOXD2PA6NHM9 499 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 HNRNPH3P31942 346 aaKnown RBP24.74■■□□□ 1.55
USF3-203ENST00000491165 VWA3BQ502W6 1294 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 C7orf31Q8N865 590 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 GOLGA5Q8TBA6 731 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 TSEN34Q9BSV6 310 aaKnown RBP24.74■■□□□ 1.55
USF3-203ENST00000491165 KIFC3Q9BVG8 833 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 COL4A3BPQ9Y5P4 624 aa24.74■■□□□ 1.55
USF3-203ENST00000491165 ADGRA3Q8IWK6 1321 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 MACROD2A1Z1Q3 448 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 SGPL1O95470 568 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 FGFR1OPO95684 399 aaKnown RBP24.73■■□□□ 1.55
USF3-203ENST00000491165 NMT1P30419 496 aaKnown RBP24.73■■□□□ 1.55
USF3-203ENST00000491165 ARL2P36404 184 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 ODR4Q5SWX8 454 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 GDF6Q6KF10 455 aaPredicted RBP24.73■■□□□ 1.55
USF3-203ENST00000491165 NFRKBQ6P4R8 1299 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 GTF2IRD1Q9UHL9 959 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 PLAGL2Q9UPG8 496 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 PPME1Q9Y570 386 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 DUSP10Q9Y6W6 482 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 MBLAC1A4D2B0 266 aaPredicted RBP24.73■■□□□ 1.55
USF3-203ENST00000491165 DNM1LO00429 736 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 GLRA2P23416 452 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 PEX3P56589 373 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 FAM26FQ5R3K3 315 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 IQCEQ6IPM2 695 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 RUFY4Q6ZNE9 571 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 ZNF668Q96K58 619 aaPredicted RBP24.73■■□□□ 1.55
USF3-203ENST00000491165 DRC1Q96MC2 740 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 NDST4Q9H3R1 872 aa24.73■■□□□ 1.55
USF3-203ENST00000491165 PLS3P13797 630 aa24.72■■□□□ 1.55
USF3-203ENST00000491165 ITGA7Q13683 1181 aa24.72■■□□□ 1.55
USF3-203ENST00000491165 PRPF31Q8WWY3 499 aaKnown RBP24.72■■□□□ 1.55
USF3-203ENST00000491165 TIPINQ9BVW5 301 aa24.72■■□□□ 1.55
USF3-203ENST00000491165 PHF24Q9UPV7 400 aa24.72■■□□□ 1.55
USF3-203ENST00000491165 SIK3Q9Y2K2 1263 aa24.72■■□□□ 1.55
USF3-203ENST00000491165 MAN2A1Q16706 1144 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 FAM47CQ5HY64 1035 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 KIFAP3Q92845 792 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 VTI1AQ96AJ9 217 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 GLT1D1Q96MS3 346 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 OLFML3Q9NRN5 406 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 CWC15Q9P013 229 aaKnown RBP24.71■■□□□ 1.55
USF3-203ENST00000491165 C17orf102A2RUQ5 167 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 KBTBD13C9JR72 458 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 ZNF263O14978 683 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 MYBP10242 640 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 ACTN2P35609 894 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 NPTX2P47972 431 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 KCNA1Q09470 495 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 ZC2HC1CQ53FD0 456 aaPredicted RBP24.71■■□□□ 1.55
USF3-203ENST00000491165 GUF1Q8N442 669 aaKnown RBP24.71■■□□□ 1.55
USF3-203ENST00000491165 TRIM58Q8NG06 486 aa24.71■■□□□ 1.55
USF3-203ENST00000491165 RRN3P2A6NIE6 340 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 PLEKP08567 350 aaPredicted RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 TNNT3P45378 269 aaPredicted RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 LRRC63Q05C16 580 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 ZBTB9Q96C00 473 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 PPP1R16BQ96T49 567 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 IFIH1Q9BYX4 1025 aaKnown RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 LARSQ9P2J5 1176 aaKnown RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 ZNF185O15231 689 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 VTNP04004 478 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 AARSP49588 968 aaKnown RBP eCLIP24.7■■□□□ 1.54
USF3-203ENST00000491165 CAPSQ13938 189 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 FAM178BQ8IXR5 827 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 KIAA0319LQ8IZA0 1049 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 DIS3LQ8TF46 1054 aaKnown RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 WNT8BQ93098 351 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 IKZF4Q9H2S9 585 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 STARD7Q9NQZ5 370 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 ARHGAP20Q9P2F6 1191 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 SUCLA2Q9P2R7 463 aaPredicted RBP24.7■■□□□ 1.54
USF3-203ENST00000491165 JRKLQ9Y4A0 524 aa24.7■■□□□ 1.54
USF3-203ENST00000491165 TULP2O00295 520 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 MAGEB2O15479 319 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 TACC1O75410 805 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 CABYRO75952 493 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 CAPN2P17655 700 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 GAP43P17677 238 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 HOXD13P35453 343 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 GJA8P48165 433 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 LEKR1Q6ZMV7 388 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 ZNF720Q7Z2F6 126 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 RHPN2Q8IUC4 686 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 SCFD1Q8WVM8 642 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 FAM207AQ9NSI2 230 aaPredicted RBP24.69■■□□□ 1.54
USF3-203ENST00000491165 PCDHA13Q9Y5I0 950 aa24.69■■□□□ 1.54
USF3-203ENST00000491165 PDE2AO00408 941 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms