RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TMEM117Q9H0C3 514 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 GBP3Q9H0R5 595 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 CDT1Q9H211 546 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 GIT1Q9Y2X7 761 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 TRIOBPQ9H2D6 2365 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 A0A0B4J269 797 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 CARNS1A5YM72 827 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 TLL1O43897 1013 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 PRPF6O94906 941 aaKnown RBP17.32■□□□□ 0.36
TRA2A-208ENST00000490942 NPTXRO95502 500 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 ITGA4P13612 1032 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 GARTP22102 1010 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 GRM5P41594 1212 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 KNOP1Q1ED39 458 aaKnown RBP17.32■□□□□ 0.36
TRA2A-208ENST00000490942 ZNF658Q5TYW1 1059 aaPredicted RBP17.32■□□□□ 0.36
TRA2A-208ENST00000490942 GLB1LQ6UWU2 654 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 SYCP3Q8IZU3 236 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 HPS3Q969F9 1004 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 MRPL9Q9BYD2 267 aaKnown RBP17.32■□□□□ 0.36
TRA2A-208ENST00000490942 FGFBP2Q9BYJ0 223 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 SLC39A2Q9NP94 309 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 KIAA1468Q9P260 1216 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 MSRAQ9UJ68 235 aa17.32■□□□□ 0.36
TRA2A-208ENST00000490942 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.32■□□□□ 0.36
TRA2A-208ENST00000490942 KCNA1Q09470 495 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 GPR153Q6NV75 609 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 SLC39A4Q6P5W5 647 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 C12orf56Q8IXR9 622 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 ABI1Q8IZP0 508 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 TSPAN18Q96SJ8 248 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 CCDC94Q9BW85 323 aaPredicted RBP17.31■□□□□ 0.36
TRA2A-208ENST00000490942 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 KANSL3Q9P2N6 904 aa17.31■□□□□ 0.36
TRA2A-208ENST00000490942 PDXKO00764 312 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 OGTO15294 1046 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 UPP2O95045 317 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
TRA2A-208ENST00000490942 HOXD13P35453 343 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 MYBPC2Q14324 1141 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 CDR2LQ86X02 465 aaPredicted RBP17.3■□□□□ 0.36
TRA2A-208ENST00000490942 GLIS3Q8NEA6 775 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 PBX4Q9BYU1 374 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 NXF3Q9H4D5 531 aaKnown RBP17.3■□□□□ 0.36
TRA2A-208ENST00000490942 PLEKHA5Q9HAU0 1116 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 TOPORSQ9NS56 1045 aaPredicted RBP17.3■□□□□ 0.36
TRA2A-208ENST00000490942 RNF19AQ9NV58 838 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 ANKFY1Q9P2R3 1169 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 USP20Q9Y2K6 914 aa17.3■□□□□ 0.36
TRA2A-208ENST00000490942 RANBP2P49792 3224 aaKnown RBP17.3■□□□□ 0.36
TRA2A-208ENST00000490942 TGFB1I1O43294 461 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 FAM189A1O60320 539 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 OFD1O75665 1012 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 CLTAP09496 248 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 ADSSP30520 456 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 MORC3Q14149 939 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 NFIL3Q16649 462 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 CLLU1OSQ5K130 101 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 FAM109BQ6ICB4 259 aaPredicted RBP17.29■□□□□ 0.36
TRA2A-208ENST00000490942 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
TRA2A-208ENST00000490942 LRRC43Q8N309 656 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
TRA2A-208ENST00000490942 SAMD11Q96NU1 681 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 ACAP3Q96P50 834 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 KIAA1586Q9HCI6 787 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 TYW1Q9NV66 732 aaKnown RBP17.29■□□□□ 0.36
TRA2A-208ENST00000490942 MAN1B1Q9UKM7 699 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 RWDD3Q9Y3V2 267 aa17.29■□□□□ 0.36
TRA2A-208ENST00000490942 PTPRSQ13332 1948 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 ANKRD63C9JTQ0 380 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 ADRB2P07550 413 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 YARSP54577 528 aaKnown RBP17.28■□□□□ 0.36
TRA2A-208ENST00000490942 STIM1Q13586 685 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 BTG3Q14201 252 aaPredicted RBP17.28■□□□□ 0.36
TRA2A-208ENST00000490942 CAMK4Q16566 473 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 SLC9A9Q8IVB4 645 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 CD302Q8IX05 232 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 RNF169Q8NCN4 708 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
TRA2A-208ENST00000490942 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 HAPLN2Q9GZV7 340 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 KCTD10Q9H3F6 313 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 AGPAT3Q9NRZ7 376 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
TRA2A-208ENST00000490942 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
TRA2A-208ENST00000490942 RECQL4O94761 1208 aa17.27■□□□□ 0.36
TRA2A-208ENST00000490942 FGFR1P11362 822 aa17.27■□□□□ 0.36
TRA2A-208ENST00000490942 DNAJB2P25686 324 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms