RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 PPP2R2AP63151 447 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 SEC16BQ96JE7 1060 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 PRMT1Q99873 361 aaKnown RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 RGS17Q9UGC6 210 aaPredicted RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 ATAD5Q96QE3 1844 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 GMNCA6NCL1 334 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 GRIN3BO60391 1043 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 ECM2O94769 699 aaPredicted RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 YWHABP31946 246 aaKnown RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 XKR9Q5GH70 373 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 C6orf89Q6UWU4 347 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
TNXB-206ENST00000490077 VCPKMTQ9H867 229 aa14.28□□□□□ -0.12
TNXB-206ENST00000490077 NCANO14594 1321 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 ANKRD62A6NC57 917 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 HMGB1P1B2RPK0 211 aaPredicted RBP14.27□□□□□ -0.12
TNXB-206ENST00000490077 FAM107AO95990 144 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 KIF22Q14807 665 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 VPS36Q86VN1 386 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.12
TNXB-206ENST00000490077 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
TNXB-206ENST00000490077 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.13
TNXB-206ENST00000490077 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
TNXB-206ENST00000490077 KRT5P13647 590 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 GAP43P17677 238 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 LMNB1P20700 586 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 ACOT2P49753 483 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 PMS2P54278 862 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 CUL1Q13616 776 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 POTEAQ6S8J7 498 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.13
TNXB-206ENST00000490077 SEC14L1Q92503 715 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
TNXB-206ENST00000490077 DOCK5Q9H7D0 1870 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 PI4K2BG5E9Z4 385 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 ETS1P14921 441 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 DRD4P21917 467 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 NRLP54845 237 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 DLGAP5Q15398 846 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 SNRNP35Q16560 246 aaKnown RBP14.26□□□□□ -0.13
TNXB-206ENST00000490077 ICE2Q659A1 982 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 CCDC105Q8IYK2 499 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 HELQQ8TDG4 1101 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 ZNF653Q96CK0 615 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
TNXB-206ENST00000490077 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 ZNFX1Q9P2E3 1918 aaKnown RBP14.26□□□□□ -0.13
TNXB-206ENST00000490077 GOLGA6L10A6NI86 522 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 H0YHG0 523 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 PPFIA2O75334 1257 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 BANF1O75531 89 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 ZSCAN5DPP0CG00 497 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 CNGA1P29973 690 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 NPTX2P47972 431 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 MXI1P50539 228 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 PRKG1Q13976 671 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 TAS1R3Q7RTX0 852 aa14.26□□□□□ -0.13
TNXB-206ENST00000490077 TNS1Q9HBL0 1735 aaKnown RBP14.26□□□□□ -0.13
TNXB-206ENST00000490077 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 GTPBP10A4D1E9 387 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 SPOPO43791 374 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 CLSTN1O94985 981 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 CYP11B1P15538 503 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 RRM1P23921 792 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 SLC15A2Q16348 729 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 KYNUQ16719 465 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 GDAP1Q8TB36 358 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 ZNF564Q8TBZ8 553 aaPredicted RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 ZKSCAN4Q969J2 545 aaPredicted RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 ARHGEF10LQ9HCE6 1279 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 RGS20O76081 388 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 MNAT1P51948 309 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 MTMR1Q13613 665 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 RASA3Q14644 834 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 TXNRD3NBQ6F5E7 133 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 SV2AQ7L0J3 742 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 SAMD7Q7Z3H4 446 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 CDR2LQ86X02 465 aaPredicted RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 LARGE2Q8N3Y3 721 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 XXYLT1Q8NBI6 393 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 CCDC26Q8TAB7 109 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 CD101Q93033 1021 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 HAUS1Q96CS2 278 aa14.25□□□□□ -0.13
TNXB-206ENST00000490077 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
TNXB-206ENST00000490077 NAP1L4Q99733 375 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms