RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
UFD1-209ENST00000489406 MAFBQ9Y5Q3 323 aaPredicted RBP17.01■□□□□ 0.31
UFD1-209ENST00000489406 SPAG17Q6Q759 2223 aa17■□□□□ 0.31
UFD1-209ENST00000489406 CSRP1P21291 193 aaKnown RBP17■□□□□ 0.31
UFD1-209ENST00000489406 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
UFD1-209ENST00000489406 CCNE1P24864 410 aa17■□□□□ 0.31
UFD1-209ENST00000489406 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
UFD1-209ENST00000489406 POTEHQ6S545 545 aa17■□□□□ 0.31
UFD1-209ENST00000489406 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
UFD1-209ENST00000489406 ELSPBP1Q96BH3 223 aa17■□□□□ 0.31
UFD1-209ENST00000489406 GPR62Q9BZJ7 368 aa17■□□□□ 0.31
UFD1-209ENST00000489406 SENP2Q9HC62 589 aa17■□□□□ 0.31
UFD1-209ENST00000489406 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
UFD1-209ENST00000489406 KCNH3Q9ULD8 1083 aa17■□□□□ 0.31
UFD1-209ENST00000489406 CAPNS1P04632 268 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 PXNP49023 591 aaPredicted RBP16.99■□□□□ 0.31
UFD1-209ENST00000489406 USP41Q3LFD5 358 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 CEP55Q53EZ4 464 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 PRSS55Q6UWB4 352 aaPredicted RBP16.99■□□□□ 0.31
UFD1-209ENST00000489406 DEFB124Q8NES8 71 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 MKNK1Q9BUB5 465 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 TRMT61BQ9BVS5 477 aaKnown RBP16.99■□□□□ 0.31
UFD1-209ENST00000489406 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 ZNF334Q9HCZ1 680 aaPredicted RBP16.99■□□□□ 0.31
UFD1-209ENST00000489406 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
UFD1-209ENST00000489406 TICRRQ7Z2Z1 1910 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 TENM4Q6N022 2769 aa16.99■□□□□ 0.31
UFD1-209ENST00000489406 A0A087WZ62 844 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 HOXA6P31267 233 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 C19orf57Q0VDD7 668 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 LRRC32Q14392 662 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 HNRNPLLQ8WVV9 542 aaKnown RBP16.98■□□□□ 0.31
UFD1-209ENST00000489406 IRF7Q92985 503 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 FDXACB1Q9BRP7 624 aaPredicted RBP16.98■□□□□ 0.31
UFD1-209ENST00000489406 GDE1Q9NZC3 331 aa16.98■□□□□ 0.31
UFD1-209ENST00000489406 NOTCH4Q99466 2003 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 PRB1P04280 392 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 GDI1P31150 447 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 HOXA9P31269 272 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 MFAP1P55081 439 aaKnown RBP16.97■□□□□ 0.31
UFD1-209ENST00000489406 FGD1P98174 961 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 CREMQ03060 361 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 DRP2Q13474 957 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 FUT10Q6P4F1 479 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 CATSPER4Q7RTX7 472 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
UFD1-209ENST00000489406 MAP4K3Q8IVH8 894 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 LRIG1Q96JA1 1093 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 PGBD1Q96JS3 809 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 GABBR1Q9UBS5 961 aa16.97■□□□□ 0.31
UFD1-209ENST00000489406 CNTNAP2Q9UHC6 1331 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 COL4A2P08572 1712 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 LNP1A1A4G5 178 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 MEIS1O00470 390 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 NRG2O14511 850 aaPredicted RBP16.96■□□□□ 0.31
UFD1-209ENST00000489406 DHX15O43143 795 aaKnown RBP16.96■□□□□ 0.31
UFD1-209ENST00000489406 FCARP24071 287 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
UFD1-209ENST00000489406 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 GPR65Q8IYL9 337 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 SPZ1Q9BXG8 430 aa16.96■□□□□ 0.31
UFD1-209ENST00000489406 MYH9P35579 1960 aaKnown RBP16.95■□□□□ 0.3
UFD1-209ENST00000489406 IFIT3O14879 490 aaKnown RBP16.95■□□□□ 0.3
UFD1-209ENST00000489406 NR1I2O75469 434 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 CEBPBP17676 345 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 CREB5Q02930 508 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 UAP1L1Q3KQV9 507 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 WDR44Q5JSH3 913 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 RTP2Q5QGT7 225 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 LARP1BQ659C4 914 aaKnown RBP16.95■□□□□ 0.3
UFD1-209ENST00000489406 ZC3H10Q96K80 434 aaKnown RBP16.95■□□□□ 0.3
UFD1-209ENST00000489406 FAM167AQ96KS9 214 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 CLSTN3Q9BQT9 956 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 ZFP14Q9HCL3 533 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 TMEM9BQ9NQ34 198 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 TRPV5Q9NQA5 729 aa16.95■□□□□ 0.3
UFD1-209ENST00000489406 CAVIN2O95810 425 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 PSAPP07602 524 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 ZNF76P36508 570 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 DSC1Q08554 894 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 FAM78AQ5JUQ0 283 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 AXDND1Q5T1B0 1012 aaPredicted RBP16.94■□□□□ 0.3
UFD1-209ENST00000489406 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 INO80BQ9C086 356 aaPredicted RBP16.94■□□□□ 0.3
UFD1-209ENST00000489406 MIOSQ9NXC5 875 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 DACH1Q9UI36 760 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
UFD1-209ENST00000489406 EXTL3O43909 919 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 RHOP08100 348 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 CDC42EP1Q00587 391 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 SCAPQ12770 1279 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 PLK5Q496M5 336 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 GAD1Q99259 594 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
UFD1-209ENST00000489406 WDR81Q562E7 1941 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 ASXL3Q9C0F0 2248 aa16.92■□□□□ 0.3
UFD1-209ENST00000489406 SPAARA0A1B0GVQ0 90 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms