RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TMEM31Q5JXX7 168 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 COLGALT2Q8IYK4 626 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 SUSD6Q92537 303 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 KHSRPQ92945 711 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 AK8Q96MA6 479 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 ZFP42Q96MM3 310 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 PHF7Q9BWX1 381 aaPredicted RBP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 PDZD7Q9H5P4 517 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 SLC26A4O43511 780 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 GPR37L1O60883 481 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 SOD2P04179 222 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 URODP06132 367 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 LIG1P18858 919 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 AKAP5P24588 427 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 ITIH3Q06033 890 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 CUL4AQ13619 759 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 CBX2Q14781 532 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 HYIQ5T013 277 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 CES5AQ6NT32 575 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 HERC2P3Q9BVR0 1158 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 COLEC11Q9BWP8 271 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 C17orf75Q9HAS0 396 aa15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
SPTLC1-207ENST00000488921 CITO14578 2027 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 PLXNA3P51805 1871 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 DENND4AQ7Z401 1863 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 COL9A1P20849 921 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 CDC25AP30304 524 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 ZRSR1Q15695 479 aaKnown RBP15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 NECTIN4Q96NY8 510 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 VN1R3Q9BXE9 311 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 BACH2Q9BYV9 841 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 S1PR5Q9H228 398 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 MARCH5Q9NX47 278 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 KCNG1Q9UIX4 513 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 TRIP11Q15643 1979 aa15.21■□□□□ 0.03
SPTLC1-207ENST00000488921 MYH15Q9Y2K3 1946 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 CCDC169A6NNP5 214 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 LOC730098B7Z3J9 87 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 K7ERI5 159 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 HIP1RO75146 1068 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 NPTX2P47972 431 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 PEX3P56589 373 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 ATF7IP2Q5U623 682 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 RINT1Q6NUQ1 792 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 ELMSAN1Q6PJG2 1045 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 RIPOR3Q96MK2 946 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 LRFN3Q9BTN0 628 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 TMEM134Q9H6X4 195 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 KMT5AQ9NQR1 393 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 MIOSQ9NXC5 875 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
SPTLC1-207ENST00000488921 MTCL1Q9Y4B5 1905 aaKnown RBP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 RECQL4O94761 1208 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 MTHFRP42898 656 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 GLUD2P49448 558 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 TUSC3Q13454 348 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 HERC4Q5GLZ8 1057 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 KCNK18Q7Z418 384 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 CABP7Q86V35 215 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 RNF135Q8IUD6 432 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 GSTCDQ8NEC7 633 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 CALML4Q96GE6 196 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 RUSC1Q9BVN2 902 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 ADAM7Q9H2U9 754 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 ARHGAP28Q9P2N2 729 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 DPP7Q9UHL4 492 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 ADAM28Q9UKQ2 775 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 NR2E1Q9Y466 385 aa15.19■□□□□ 0.02
SPTLC1-207ENST00000488921 PDCD11Q14690 1871 aaKnown RBP15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 C2orf16Q68DN1 1984 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 PRR33A8MZF0 331 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 EDN1P05305 212 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 THP07101 528 aa15.18■□□□□ 0.02
SPTLC1-207ENST00000488921 ADH1AP07327 375 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms