RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 SYCP3Q8IZU3 236 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 GUF1Q8N442 669 aaKnown RBP12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 SLC39A2Q9NP94 309 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 STYXL1Q9Y6J8 313 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 LAMA2P24043 3122 aaKnown RBP12.83□□□□□ -0.36
CEACAM1-212ENST00000488639 RANBP2P49792 3224 aaKnown RBP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 CLDN3O15551 220 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 B4GALT5O43286 388 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 GARTP22102 1010 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 TCTN1Q2MV58 587 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 ZC2HC1CQ53FD0 456 aaPredicted RBP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 MRPL10Q7Z7H8 261 aaKnown RBP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 KIAA0895Q8NCT3 520 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 LRFN2Q9ULH4 789 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 PCDHB2Q9Y5E7 798 aa12.82□□□□□ -0.36
CEACAM1-212ENST00000488639 CITO14578 2027 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 RALGAPA2Q2PPJ7 1873 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 A0A0B4J269 797 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 PDXKO00764 312 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 LDHAP00338 332 aaKnown RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 EDN1P05305 212 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 MORC3Q14149 939 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 MYBPC2Q14324 1141 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 SHHQ15465 462 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 CAMK4Q16566 473 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 NFIL3Q16649 462 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 ZNF568Q3ZCX4 644 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 UBXN11Q5T124 520 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 FOXR2Q6PJQ5 311 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 C12orf56Q8IXR9 622 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 TCHPQ9BT92 498 aa12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 TYW1Q9NV66 732 aaKnown RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
CEACAM1-212ENST00000488639 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 ABLIM1O14639 778 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 OGTO15294 1046 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 INPPL1O15357 1258 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 GJB5O95377 273 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 NPTXRO95502 500 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 GRM5P41594 1212 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 C9orf50Q5SZB4 431 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 FGFBP2Q9BYJ0 223 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 CXXC1Q9P0U4 656 aaPredicted RBP12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 MAN1B1Q9UKM7 699 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 IPPQ9Y573 584 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 INSL6Q9Y581 213 aa12.8□□□□□ -0.36
CEACAM1-212ENST00000488639 PSMA7O14818 248 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 CALUO43852 315 aaPredicted RBP12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 ITGA4P13612 1032 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 HOXD13P35453 343 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 DEFB103AP81534 67 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 KCNA1Q09470 495 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 SLC39A4Q6P5W5 647 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 SLC9A9Q8IVB4 645 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 HERC6Q8IVU3 1022 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 SMG8Q8ND04 991 aaKnown RBP12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 POMGNT1Q8WZA1 660 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 RAD9AQ99638 391 aa12.79□□□□□ -0.36
CEACAM1-212ENST00000488639 MSTO1Q9BUK6 570 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms