RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CYP4A11Q02928 519 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 SPIRE1Q08AE8 756 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 CTTNQ14247 550 aaKnown RBP21.2■□□□□ 0.98
GGPS1-206ENST00000488594 RSAD2Q8WXG1 361 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 ZNF707Q96C28 371 aaPredicted RBP21.2■□□□□ 0.98
GGPS1-206ENST00000488594 DYDC2Q96IM9 177 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 LARP6Q9BRS8 491 aaKnown RBP21.2■□□□□ 0.98
GGPS1-206ENST00000488594 NFKBIZQ9BYH8 718 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 PIDD1Q9HB75 910 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 FNIP2Q9P278 1114 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 HES2Q9Y543 173 aa21.2■□□□□ 0.98
GGPS1-206ENST00000488594 ZMYM2Q9UBW7 1377 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 USP41Q3LFD5 358 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 TPH2Q8IWU9 490 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 CPB2Q96IY4 423 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 MYADMQ96S97 322 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 NT5C3AQ9H0P0 336 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 XPNPEP1Q9NQW7 623 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 C2orf16Q68DN1 1984 aa21.19■□□□□ 0.98
GGPS1-206ENST00000488594 KRBA1A5PL33 1030 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 TGM5O43548 720 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 DGAT1O75907 488 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 SLITRK3O94933 977 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 LYPLA2O95372 231 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 MBTD1Q05BQ5 628 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 FUT10Q6P4F1 479 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 POTEDQ86YR6 584 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 PDRG1Q9NUG6 133 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 MIOSQ9NXC5 875 aa21.18■□□□□ 0.98
GGPS1-206ENST00000488594 SPTBN4Q9H254 2564 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ZBTB39O15060 712 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 SPATA31D3P0C874 917 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 LAMP2P13473 410 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ARF4P18085 180 aaPredicted RBP21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ID4P47928 161 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 SCRN1Q12765 414 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 GRIK3Q13003 919 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 AMHR2Q16671 573 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 PHLDB3Q6NSJ2 640 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 SPATA31D4Q6ZUB0 917 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 PALB2Q86YC2 1186 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 APOL6Q9BWW8 343 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 GPR62Q9BZJ7 368 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 PRKD2Q9BZL6 878 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 NXF3Q9H4D5 531 aaKnown RBP21.17■□□□□ 0.98
GGPS1-206ENST00000488594 TBC1D17Q9HA65 648 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ANKEF1Q9NU02 776 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ADAM28Q9UKQ2 775 aa21.17■□□□□ 0.98
GGPS1-206ENST00000488594 ZFP37Q9Y6Q3 630 aaPredicted RBP21.17■□□□□ 0.98
GGPS1-206ENST00000488594 F8W810 466 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 MYBP10242 640 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 ARL2P36404 184 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 CAPSQ13938 189 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 SLC27A1Q6PCB7 646 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 LILRA6Q6PI73 481 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 GSTCDQ8NEC7 633 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 OXER1Q8TDS5 423 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 CCDC43Q96MW1 224 aaKnown RBP21.16■□□□□ 0.98
GGPS1-206ENST00000488594 HSD17B14Q9BPX1 270 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 EIF2AK1Q9BQI3 630 aaKnown RBP21.16■□□□□ 0.98
GGPS1-206ENST00000488594 CA14Q9ULX7 337 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 PCDHA12Q9UN75 941 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 GVINP1Q7Z2Y8 2422 aa21.16■□□□□ 0.98
GGPS1-206ENST00000488594 ANHXE9PGG2 379 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 GET4Q7L5D6 327 aaPredicted RBP21.15■□□□□ 0.98
GGPS1-206ENST00000488594 GPR152Q8TDT2 470 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 ASAP3Q8TDY4 903 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 RIN2Q8WYP3 895 aaPredicted RBP21.15■□□□□ 0.98
GGPS1-206ENST00000488594 WASF1Q92558 559 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 B3GALT6Q96L58 329 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 ARHGEF3Q9NR81 526 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 SLC2A4RGQ9NR83 387 aa21.15■□□□□ 0.98
GGPS1-206ENST00000488594 SF3B1O75533 1304 aaKnown RBP eCLIP21.15■□□□□ 0.989e-6■■■■■ 68.9
GGPS1-206ENST00000488594 A0A1B0GUA9 196 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 TADA2AO75478 443 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 ZMYND10O75800 440 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 LMNAP02545 664 aaKnown RBP21.14■□□□□ 0.98
GGPS1-206ENST00000488594 AKAP5P24588 427 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 KCNG4Q8TDN1 519 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 BRMS1Q9HCU9 246 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 SIT1Q9Y3P8 196 aa21.14■□□□□ 0.98
GGPS1-206ENST00000488594 GLRA2P23416 452 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 RARRES1P49788 294 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 HTR4Q13639 388 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 ZC3H14Q6PJT7 736 aaKnown RBP21.13■□□□□ 0.97
GGPS1-206ENST00000488594 GJB4Q9NTQ9 266 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 PARP2Q9UGN5 583 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 VPS13AQ96RL7 3174 aa21.13■□□□□ 0.97
GGPS1-206ENST00000488594 B4GALT5O43286 388 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 PFKFB2O60825 505 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 NPTXRO95502 500 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 XRCC6P12956 609 aaKnown RBP eCLIP21.12■□□□□ 0.97
GGPS1-206ENST00000488594 KRT2P35908 639 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 HSP90AA2PQ14568 343 aaPredicted RBP21.12■□□□□ 0.97
GGPS1-206ENST00000488594 EARS2Q5JPH6 523 aaKnown RBP21.12■□□□□ 0.97
GGPS1-206ENST00000488594 GLYCTKQ8IVS8 523 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 NUMBLQ9Y6R0 609 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 DMDP11532 3685 aa21.12■□□□□ 0.97
GGPS1-206ENST00000488594 HNRNPA1P09651 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms