RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RFX1P22670 979 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 EIF4A3P38919 411 aaKnown RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ARHGAP25P42331 645 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 FLT3LGP49771 235 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 APLP1P51693 650 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ETF1P62495 437 aaKnown RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 C15orf39Q6ZRI6 1047 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF662Q6ZS27 426 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 TSHZ1Q6ZSZ6 1077 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 CCDC127Q96BQ5 260 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 CCDC42Q96M95 316 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 MSTO1Q9BUK6 570 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 PTPRHQ9HD43 1115 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 NRCAMQ92823 1304 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MBLAC1A4D2B0 266 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 RBAK-RBAKDNI3L0D1 243 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 TBC1D8O95759 1140 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 IQCF3P0C7M6 154 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SMIM10L2AP0DMW4 78 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SMIM10L2BP0DMW5 78 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 TMOD1P28289 359 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PRKCIP41743 596 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PHKA2P46019 1235 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 ACOT2P49753 483 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 KIF11P52732 1056 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 WNT7BP56706 349 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 KRT83P78385 493 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PRKCZQ05513 592 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MCL1Q07820 350 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 CETN1Q12798 172 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MFSD10Q14728 455 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 FAM187BQ17R55 369 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 KIAA0753Q2KHM9 967 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SLC9C1Q4G0N8 1177 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 ZBTB41Q5SVQ8 909 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 KRT39Q6A163 491 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PHLDB3Q6NSJ2 640 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 IRF2BP2Q7Z5L9 587 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SPAG5Q96R06 1193 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 POP1Q99575 1024 aaKnown RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 AP5M1Q9H0R1 490 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 TOPORSQ9NS56 1045 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 CNTNAP2Q9UHC6 1331 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 A0A087WZ62 844 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 F8VZ95 297 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 INO80B-WBP1J3KQ70 363 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 CLDN3O15551 220 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 B4GALT5O43286 388 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 DUSP11O75319 330 aaKnown RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 LRRN2O75325 713 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 VTNP04004 478 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 ADAM17P78536 824 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SP3Q02447 781 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MAP2K1Q02750 393 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 ASIC2Q16515 512 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 FSCN1Q16658 493 aaKnown RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 AMHR2Q16671 573 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MFSD14CQ5VZR4 134 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 KIAA0319LQ8IZA0 1049 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF668Q96K58 619 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 FDXACB1Q9BRP7 624 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 STK33Q9BYT3 514 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 INO80BQ9C086 356 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 UPF3AQ9H1J1 476 aaKnown RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 LZTFL1Q9NQ48 299 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 SETD4Q9NVD3 440 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PRMT7Q9NVM4 692 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-211ENST00000487698 DNAJC12Q9UKB3 198 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 AKT3Q9Y243 479 aa10.24□□□□□ -0.77
SF3B1-211ENST00000487698 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 CITO14578 2027 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 ABL1P00519 1130 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 HOXC8P31273 242 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 PSEN2P49810 448 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 GPC3P51654 580 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 GJA9P57773 515 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 NKX3-2P78367 333 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 BEX3Q00994 111 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 PRPF4BQ13523 1007 aaKnown RBP10.23□□□□□ -0.77
SF3B1-211ENST00000487698 TDRD12Q587J7 1177 aaKnown RBP10.23□□□□□ -0.77
SF3B1-211ENST00000487698 ATF7IP2Q5U623 682 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 NFRKBQ6P4R8 1299 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 SYT10Q6XYQ8 523 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 SV2AQ7L0J3 742 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 ARHGEF19Q8IW93 802 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 SEMA4DQ92854 862 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 PRIMPOLQ96LW4 560 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 PDE11AQ9HCR9 933 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 RBAKQ9NYW8 714 aaPredicted RBP10.23□□□□□ -0.77
SF3B1-211ENST00000487698 R3HCC1Q9Y3T6 440 aaKnown RBP10.23□□□□□ -0.77
SF3B1-211ENST00000487698 PAXBP1Q9Y5B6 917 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 RALGAPA2Q2PPJ7 1873 aa10.23□□□□□ -0.77
SF3B1-211ENST00000487698 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms