RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 GARTP22102 1010 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 PRCPP42785 496 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 NOLC1Q14978 699 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL4A6-207ENST00000487645 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 ZNF568Q3ZCX4 644 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 SLC39A4Q6P5W5 647 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 CDR2LQ86X02 465 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-207ENST00000487645 HERC6Q8IVU3 1022 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 SMG8Q8ND04 991 aaKnown RBP14.56□□□□□ -0.08
COL4A6-207ENST00000487645 GOLGA5Q8TBA6 731 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 TMEM174Q8WUU8 243 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 CDT1Q9H211 546 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 IPPQ9Y573 584 aa14.56□□□□□ -0.08
COL4A6-207ENST00000487645 TDRD15B5MCY1 1934 aaKnown RBP14.56□□□□□ -0.08
COL4A6-207ENST00000487645 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 BIN1O00499 593 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 PDXKO00764 312 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 KIAA0391O15091 583 aaKnown RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 OGTO15294 1046 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 TGFB1I1O43294 461 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 HOXA2O43364 376 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 DGKIO75912 1065 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 UPP2O95045 317 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 GJB5O95377 273 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ITGA4P13612 1032 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ATF7P17544 494 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 BMP6P22004 513 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ADSSP30520 456 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 GRM5P41594 1212 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 POU5F1Q01860 360 aaKnown RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 STIM1Q13586 685 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 HS2ST1Q7LGA3 356 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ZBTB33Q86T24 672 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 NELFCDQ8IXH7 590 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 POMGNT1Q8WZA1 660 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 HAPLN2Q9GZV7 340 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 KCTD10Q9H3F6 313 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 TYW1Q9NV66 732 aaKnown RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 ANKFY1Q9P2R3 1169 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 MAPK8IP1Q9UQF2 711 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 COLQQ9Y215 455 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-207ENST00000487645 GIT1Q9Y2X7 761 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 INSL6Q9Y581 213 aa14.55□□□□□ -0.08
COL4A6-207ENST00000487645 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 LDHAP00338 332 aaKnown RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 HTRA4P83105 476 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 MYBPC2Q14324 1141 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 CAVIN1Q6NZI2 390 aaKnown RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 AGMOQ6ZNB7 445 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 C12orf56Q8IXR9 622 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 SMYD4Q8IYR2 804 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 ADSSL1Q8N142 457 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 MLKLQ8NB16 471 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 DHTKD1Q96HY7 919 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 RAD9AQ99638 391 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 ZBED2Q9BTP6 218 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 MSTO1Q9BUK6 570 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 IKZF4Q9H2S9 585 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 NXF3Q9H4D5 531 aaKnown RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 AGPAT3Q9NRZ7 376 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 AGO2Q9UKV8 859 aaKnown RBP14.54□□□□□ -0.08
COL4A6-207ENST00000487645 TRAF3IP3Q9Y228 551 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 ZMYM2Q9UBW7 1377 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 ANK1P16157 1881 aa14.54□□□□□ -0.08
COL4A6-207ENST00000487645 PDCD11Q14690 1871 aaKnown RBP14.53□□□□□ -0.08
COL4A6-207ENST00000487645 PPP1R3GB7ZBB8 358 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 PSMA7O14818 248 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 CALUO43852 315 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-207ENST00000487645 FAM189A1O60320 539 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 CLTAP09496 248 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 NFIL3Q16649 462 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 CENPPQ6IPU0 288 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 ARMCX5Q6P1M9 558 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 SLC9A9Q8IVB4 645 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 ZNF689Q96CS4 500 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-207ENST00000487645 ACAP3Q96P50 834 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 DMAC2Q9NW81 257 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 SNTG2Q9NY99 539 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 KANSL3Q9P2N6 904 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 HES2Q9Y543 173 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
COL4A6-207ENST00000487645 TISP43B9A030 160 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 INPPL1O15357 1258 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 TLL1O43897 1013 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 OFD1O75665 1012 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 AKAP5P24588 427 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 YARSP54577 528 aaKnown RBP14.52□□□□□ -0.09
COL4A6-207ENST00000487645 NLRP12P59046 1061 aa14.52□□□□□ -0.09
COL4A6-207ENST00000487645 EDRF1Q3B7T1 1238 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms