RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 GBP3Q9H0R5 595 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 CUEDC2Q9H467 287 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 NSUN3Q9H649 340 aaKnown RBP19.99■□□□□ 0.79
COL1A1-207ENST00000486572 NRDE2Q9H7Z3 1164 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 FAM13BQ9NYF5 915 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 SPG21Q9NZD8 308 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 PARP2Q9UGN5 583 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 ATG2AQ2TAZ0 1938 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 CSPG5O95196 566 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 SCNN1GP51170 649 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 NUCB2P80303 420 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 PLCB3Q01970 1234 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 ZNF568Q3ZCX4 644 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 RESP18Q5W5W9 173 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 ZNF280BQ86YH2 543 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.98■□□□□ 0.79
COL1A1-207ENST00000486572 FAM178BQ8IXR5 827 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 IQUBQ8NA54 791 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 DHX58Q96C10 678 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 FAM193BQ96PV7 902 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-207ENST00000486572 PTPRHQ9HD43 1115 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 DNAJB4Q9UDY4 337 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 LZTS1Q9Y250 596 aa19.98■□□□□ 0.79
COL1A1-207ENST00000486572 B4GALT3O60512 393 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 PROZP22891 400 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 ABCD1P33897 745 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 KRT17Q04695 432 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 MPZL3Q6UWV2 235 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 ZPBP2Q6X784 338 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 SLC17A8Q8NDX2 589 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 MRPS27Q92552 414 aaKnown RBP19.97■□□□□ 0.79
COL1A1-207ENST00000486572 DNAJC19Q96DA6 116 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 RPS6KC1Q96S38 1066 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 FIZ1Q96SL8 496 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 TMEM175Q9BSA9 504 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 SCAND2PQ9GZW5 306 aaPredicted RBP19.97■□□□□ 0.79
COL1A1-207ENST00000486572 CDT1Q9H211 546 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 PRDM6Q9NQX0 595 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 TLR9Q9NR96 1032 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 SNTG2Q9NY99 539 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 KLK14Q9P0G3 267 aa19.97■□□□□ 0.79
COL1A1-207ENST00000486572 PUF60Q9UHX1 559 aaKnown RBP19.97■□□□□ 0.79
COL1A1-207ENST00000486572 NT5C1B-RDH14C9J2C7 533 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 TOM1L1O75674 476 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 RECQL4O94761 1208 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 DDHD2O94830 711 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 GALTP07902 379 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 MCF2P10911 925 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 GAP43P17677 238 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 SLC11A1P49279 550 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 TCEAL5Q5H9L2 206 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 SFR1Q86XK3 245 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 GSTCDQ8NEC7 633 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 BICD1Q96G01 975 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 TMEM169Q96HH4 297 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 TCHPQ9BT92 498 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 LRRC27Q9C0I9 530 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 ANKFY1Q9P2R3 1169 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 THEGQ9P2T0 379 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 SEL1LQ9UBV2 794 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 TBX20Q9UMR3 447 aa19.96■□□□□ 0.79
COL1A1-207ENST00000486572 ABLIM1O14639 778 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 POLR2DO15514 142 aaKnown RBP19.95■□□□□ 0.78
COL1A1-207ENST00000486572 NMT1P30419 496 aaKnown RBP19.95■□□□□ 0.78
COL1A1-207ENST00000486572 IRS1P35568 1242 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 DSC1Q08554 894 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 GRIK3Q13003 919 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 ZBTB33Q86T24 672 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 PYM1Q9BRP8 204 aaKnown RBP19.95■□□□□ 0.78
COL1A1-207ENST00000486572 ST6GALNAC4Q9H4F1 302 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 MAGEF1Q9HAY2 307 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 KBTBD4Q9NVX7 518 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 MIOSQ9NXC5 875 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 GDAQ9Y2T3 454 aa19.95■□□□□ 0.78
COL1A1-207ENST00000486572 HNRNPDLO14979 420 aaKnown RBP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 IDEP14735 1019 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 GRM5P41594 1212 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 GTF2BQ00403 316 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 AMPD3Q01432 767 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 NOLC1Q14978 699 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 ADALQ6DHV7 355 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 PDE12Q6L8Q7 609 aaKnown RBP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 TMEM173Q86WV6 379 aaPredicted RBP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 COLGALT2Q8IYK4 626 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 CEP120Q8N960 986 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 STAMQ92783 540 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 PPP2R3CQ969Q6 453 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 IGSF21Q96ID5 467 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 CCDC94Q9BW85 323 aaPredicted RBP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 KCNH3Q9ULD8 1083 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 COG5Q9UP83 839 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 TDRD15B5MCY1 1934 aaKnown RBP19.94■□□□□ 0.78
COL1A1-207ENST00000486572 PRUNE2Q8WUY3 3088 aa19.94■□□□□ 0.78
COL1A1-207ENST00000486572 REV3LO60673 3130 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 FRMD3A2A2Y4 597 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 FSCN2O14926 492 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 PIGRP01833 764 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 ALDH2P05091 517 aa19.93■□□□□ 0.78
COL1A1-207ENST00000486572 HARSP12081 509 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms