RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 HAUS6Q7Z4H7 955 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 ZBTB33Q86T24 672 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 BICD1Q96G01 975 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 ZFP42Q96MM3 310 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 ZNF558Q96NG5 402 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 GAD1Q99259 594 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 ACO2Q99798 780 aaKnown RBP16.21■□□□□ 0.19
USP4-212ENST00000486549 NTPCRQ9BSD7 190 aaKnown RBP16.21■□□□□ 0.19
USP4-212ENST00000486549 UBN1Q9NPG3 1134 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 KLK14Q9P0G3 267 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 TNFSF13BQ9Y275 285 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
USP4-212ENST00000486549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.2■□□□□ 0.18
USP4-212ENST00000486549 ARL5CA6NH57 179 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
USP4-212ENST00000486549 SCNN1GP51170 649 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 TIGD5Q53EQ6 642 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 P2RX5Q93086 422 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 DNAJC19Q96DA6 116 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 MRPL38Q96DV4 380 aaKnown RBP16.2■□□□□ 0.18
USP4-212ENST00000486549 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 CUEDC2Q9H467 287 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 TBC1D7Q9P0N9 293 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 ANKFY1Q9P2R3 1169 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 GDAQ9Y2T3 454 aa16.2■□□□□ 0.18
USP4-212ENST00000486549 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 NT5C1B-RDH14C9J2C7 533 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 FGF18O76093 207 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 RECQL4O94761 1208 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 PFKFB1P16118 471 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 MATR3P43243 847 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP4-212ENST00000486549 BCAR1P56945 870 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 APBB1IPQ7Z5R6 666 aaPredicted RBP16.19■□□□□ 0.18
USP4-212ENST00000486549 ZNF280BQ86YH2 543 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 RSPH1Q8WYR4 309 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 ZBTB45Q96K62 511 aaPredicted RBP16.19■□□□□ 0.18
USP4-212ENST00000486549 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
USP4-212ENST00000486549 RPS6KC1Q96S38 1066 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 CDT1Q9H211 546 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 TNMDQ9H2S6 317 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 NRDE2Q9H7Z3 1164 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 DNAJB4Q9UDY4 337 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 KCNH3Q9ULD8 1083 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 GIT1Q9Y2X7 761 aa16.19■□□□□ 0.18
USP4-212ENST00000486549 NCK2O43639 380 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 B4GALT3O60512 393 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 GAP43P17677 238 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 CMA1P23946 247 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 ALDH7A1P49419 539 aaKnown RBP16.18■□□□□ 0.18
USP4-212ENST00000486549 OSTNP61366 133 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 ZC2HC1CQ53FD0 456 aaPredicted RBP16.18■□□□□ 0.18
USP4-212ENST00000486549 MPZL3Q6UWV2 235 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 CEP120Q8N960 986 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 SPPL3Q8TCT6 385 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 FIZ1Q96SL8 496 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 LRRC27Q9C0I9 530 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 LMAN2LQ9H0V9 348 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
USP4-212ENST00000486549 PANK4Q9NVE7 773 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 KBTBD4Q9NVX7 518 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 MIOSQ9NXC5 875 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 KANSL3Q9P2N6 904 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 TBX20Q9UMR3 447 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 TRIP11Q15643 1979 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 MYO7AQ13402 2215 aa16.18■□□□□ 0.18
USP4-212ENST00000486549 REV3LO60673 3130 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 TNFRSF10AO00220 468 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 HNRNPDLO14979 420 aaKnown RBP16.17■□□□□ 0.18
USP4-212ENST00000486549 DDHD2O94830 711 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 DNAJB1P25685 340 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 CASP1P29466 404 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 PPM1AP35813 382 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 AFMP43652 599 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 SLC11A1P49279 550 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 LIG4P49917 911 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 ASIC1P78348 528 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 AMPD3Q01432 767 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
USP4-212ENST00000486549 CEP57L1Q8IYX8 460 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 SLC39A11Q8N1S5 342 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 FSIP1Q8NA03 581 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 ADAMTS19Q8TE59 1207 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
USP4-212ENST00000486549 TRIM9Q9C026 710 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 PTPRHQ9HD43 1115 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 SPG21Q9NZD8 308 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 SERTAD1Q9UHV2 236 aa16.17■□□□□ 0.18
USP4-212ENST00000486549 CITO14578 2027 aa16.16■□□□□ 0.18
USP4-212ENST00000486549 ABLIM1O14639 778 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms