RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 CATSPER4Q7RTX7 472 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 NEK8Q86SG6 692 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 VPS52Q8N1B4 723 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 PRPF31Q8WWY3 499 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 TNFRSF25Q93038 417 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 CCDC34Q96HJ3 373 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 CEP170P1Q96L14 293 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 POP1Q99575 1024 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 ZBP1Q9H171 429 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 POMKQ9H5K3 350 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 XPNPEP1Q9NQW7 623 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 MIOSQ9NXC5 875 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 PUF60Q9UHX1 559 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 HOOK1Q9UJC3 728 aaKnown RBP10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 ARID2Q68CP9 1835 aa10.41□□□□□ -0.74
TMEM39A-208ENST00000486159 C2CD4DB7Z1M9 353 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 HOXA2O43364 376 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 KRT37O76014 449 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 POMCP01189 267 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 SSBP05455 408 aaKnown RBP eCLIP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 KRT17Q04695 432 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 TYRO3Q06418 890 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 ORC2Q13416 577 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 SMC1AQ14683 1233 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 HS1BP3Q53T59 392 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 NOMO2Q5JPE7 1267 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 RARS2Q5T160 578 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 RESP18Q5W5W9 173 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 PDE12Q6L8Q7 609 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 CDR2LQ86X02 465 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 ASIC4Q96FT7 647 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 IGSF21Q96ID5 467 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 CPB2Q96IY4 423 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 CDCA3Q99618 268 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 LXNQ9BS40 222 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 EIF2AQ9BY44 585 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 DHX33Q9H6R0 707 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 NGRNQ9NPE2 291 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 AGPAT5Q9NUQ2 364 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 HPSEQ9Y251 543 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 HES2Q9Y543 173 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 PCDHB2Q9Y5E7 798 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 SRPRBQ9Y5M8 271 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 COL4A3BPQ9Y5P4 624 aa10.4□□□□□ -0.74
TMEM39A-208ENST00000486159 KMT2EQ8IZD2 1858 aa10.4□□□□□ -0.75
TMEM39A-208ENST00000486159 MYO10Q9HD67 2058 aa10.4□□□□□ -0.75
TMEM39A-208ENST00000486159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 SLITRK3O94933 977 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 P4HBP07237 508 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ASGR2P07307 311 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 SFPQP23246 707 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 SYKP43405 635 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ALDH7A1P49419 539 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 DNM2P50570 870 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 LAMTOR4Q0VGL1 99 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 EPHA7Q15375 998 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 XKR9Q5GH70 373 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ARL6IP4Q66PJ3 421 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 PPP4R3AQ6IN85 833 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF410Q86VK4 478 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 RNF149Q8NC42 400 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 SMG8Q8ND04 991 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 SLC22A17Q8WUG5 538 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 RABGGTAQ92696 567 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 TMEM169Q96HH4 297 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 PDLIM2Q96JY6 352 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 FAM20AQ96MK3 541 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 PANK2Q9BZ23 570 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 NAT10Q9H0A0 1025 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 GOLPH3LQ9H4A5 285 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 CHST12Q9NRB3 414 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 ANO10Q9NW15 660 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 CACNG4Q9UBN1 327 aa10.39□□□□□ -0.75
TMEM39A-208ENST00000486159 LAD1O00515 517 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF623O75123 536 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF202O95125 648 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 PFKFB1P16118 471 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 PPM1AP35813 382 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 NDUFA8P51970 172 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TCF15Q12870 199 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 EMC2Q15006 297 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 ZRSR1Q15695 479 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 CAMK4Q16566 473 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 STX1AQ16623 288 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TMC5Q6UXY8 1006 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 MAEAQ7L5Y9 396 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms