RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 PTPN14Q15678 1187 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 CDCA2Q69YH5 1023 aaPredicted RBP23.12■■□□□ 1.29
LMBR1-217ENST00000485985 CABP7Q86V35 215 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 PPFIBP1Q86W92 1011 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 TMEM105Q8N8V8 129 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 MCPH1Q8NEM0 835 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 GAD1Q99259 594 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 TMEM175Q9BSA9 504 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 APOL6Q9BWW8 343 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 MARCH5Q9NX47 278 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 KANSL3Q9P2N6 904 aa23.12■■□□□ 1.29
LMBR1-217ENST00000485985 NRP1O14786 923 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 FXR2P51116 673 aaKnown RBP eCLIP23.11■■□□□ 1.29
LMBR1-217ENST00000485985 SCNN1GP51170 649 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 DSC1Q08554 894 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 ECM1Q16610 540 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 TMC5Q6UXY8 1006 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 COLGALT2Q8IYK4 626 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 ERMNQ8TAM6 284 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 FEZF2Q8TBJ5 459 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 FAM193BQ96PV7 902 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-217ENST00000485985 NACC1Q96RE7 527 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 UBN1Q9NPG3 1134 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 MIOSQ9NXC5 875 aa23.11■■□□□ 1.29
LMBR1-217ENST00000485985 MTCL1Q9Y4B5 1905 aaKnown RBP23.11■■□□□ 1.29
LMBR1-217ENST00000485985 TTLL13PA6NNM8 815 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 CD2BP2O95400 341 aaKnown RBP23.1■■□□□ 1.29
LMBR1-217ENST00000485985 NPTXRO95502 500 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 SSBP05455 408 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMBR1-217ENST00000485985 RABEP1Q15276 862 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 SLC27A1Q6PCB7 646 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 PADI6Q6TGC4 694 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 KLHL5Q96PQ7 755 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 TRIM6Q9C030 488 aaPredicted RBP23.1■■□□□ 1.29
LMBR1-217ENST00000485985 NOL7Q9UMY1 257 aaKnown RBP23.1■■□□□ 1.29
LMBR1-217ENST00000485985 FAN1Q9Y2M0 1017 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 PRG3Q9Y2Y8 225 aaPredicted RBP23.1■■□□□ 1.29
LMBR1-217ENST00000485985 PCDHB6Q9Y5E3 794 aa23.1■■□□□ 1.29
LMBR1-217ENST00000485985 A0A1B0GUA9 196 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 PROB1E7EW31 1015 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 F8W810 466 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 AKAP5P24588 427 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 NCBP1Q09161 790 aaKnown RBP23.09■■□□□ 1.29
LMBR1-217ENST00000485985 HAUS3Q68CZ6 603 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 ASTLQ6HA08 431 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-217ENST00000485985 GPR149Q86SP6 731 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 GSTCDQ8NEC7 633 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 EMILIN2Q9BXX0 1053 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 SFXN1Q9H9B4 322 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 STK39Q9UEW8 545 aa23.09■■□□□ 1.29
LMBR1-217ENST00000485985 VWA8A3KMH1 1905 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 ARHGEF35A5YM69 484 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 EFEMP2O95967 443 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 ALDH2P05091 517 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 EDN1P05305 212 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 CYP11B2P19099 503 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 KLRC2P26717 231 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 PTGDRQ13258 359 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 ACSF2Q96CM8 615 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-217ENST00000485985 CCDC113Q9H0I3 377 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 PRMT7Q9NVM4 692 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-217ENST00000485985 GIT1Q9Y2X7 761 aa23.08■■□□□ 1.29
LMBR1-217ENST00000485985 PTPRZ1P23471 2315 aaPredicted RBP23.07■■□□□ 1.28
LMBR1-217ENST00000485985 LILRB3O75022 631 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 CNPP09543 421 aaKnown RBP23.07■■□□□ 1.28
LMBR1-217ENST00000485985 MUTP22033 750 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 CCT6AP40227 531 aaKnown RBP23.07■■□□□ 1.28
LMBR1-217ENST00000485985 OR1G1P47890 313 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 CLCN4P51793 760 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 FAM187BQ17R55 369 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 RNF168Q8IYW5 571 aaPredicted RBP23.07■■□□□ 1.28
LMBR1-217ENST00000485985 IGSF22Q8N9C0 903 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 SNX27Q96L92 541 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 PRIMPOLQ96LW4 560 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 MFSD1Q9H3U5 465 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 FZD8Q9H461 694 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 LRWD1Q9UFC0 647 aa23.07■■□□□ 1.28
LMBR1-217ENST00000485985 ZMYM2Q9UBW7 1377 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 SPDYE4A6NLX3 237 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 SOD2P04179 222 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 CLCN5P51795 746 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 CCDC149Q6ZUS6 474 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 OTOP3Q7RTS5 596 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 TAS1R1Q7RTX1 841 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 ZBTB8OSQ8IWT0 167 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 KIFC3Q9BVG8 833 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 HERC2P3Q9BVR0 1158 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 BHMT2Q9H2M3 363 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 PDZD7Q9H5P4 517 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 POLD4Q9HCU8 107 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 MRPL17Q9NRX2 175 aaKnown RBP23.06■■□□□ 1.28
LMBR1-217ENST00000485985 KLK14Q9P0G3 267 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 USP20Q9Y2K6 914 aa23.06■■□□□ 1.28
LMBR1-217ENST00000485985 PP2D1A8MPX8 630 aa23.05■■□□□ 1.28
LMBR1-217ENST00000485985 NBL1P41271 181 aa23.05■■□□□ 1.28
LMBR1-217ENST00000485985 NAMPTP43490 491 aa23.05■■□□□ 1.28
LMBR1-217ENST00000485985 IL17AQ16552 155 aa23.05■■□□□ 1.28
LMBR1-217ENST00000485985 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
LMBR1-217ENST00000485985 SNX29Q8TEQ0 813 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms