RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 GSDMAQ96QA5 445 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 ADPGKQ9BRR6 497 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 TCHPQ9BT92 498 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 ZBED2Q9BTP6 218 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 ZMYM2Q9UBW7 1377 aa16.96■□□□□ 0.31
RPUSD3-217ENST00000485705 LCHNA4D1U4 455 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 DGKIO75912 1065 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 EOMESO95936 686 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 SKIP12755 728 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 HTRA4P83105 476 aaPredicted RBP16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 DCAF4L1Q3SXM0 396 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 CLLU1OSQ5K130 101 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 STXBP4Q6ZWJ1 553 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 TMEM192Q8IY95 271 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 SYCP3Q8IZU3 236 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 PBX4Q9BYU1 374 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 SNTG2Q9NY99 539 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 EXOC7Q9UPT5 735 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 MAPK8IP1Q9UQF2 711 aa16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
RPUSD3-217ENST00000485705 TDRD15B5MCY1 1934 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 BIN1O00499 593 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 SOX1O00570 391 aaPredicted RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 CLDN3O15551 220 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 TGFB1I1O43294 461 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 TLL1O43897 1013 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 ARHGEF15O94989 841 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 MCF2P10911 925 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 ITGA4P13612 1032 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 AKAP5P24588 427 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 ADSSP30520 456 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 AFF1P51825 1210 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 OSTNP61366 133 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 MCL1Q07820 350 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 BMT2Q1RMZ1 405 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 LRIT3Q3SXY7 679 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 PAN2Q504Q3 1202 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 THNSL1Q8IYQ7 743 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 HELQQ8TDG4 1101 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 ZNF689Q96CS4 500 aaPredicted RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 YME1L1Q96TA2 773 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 RAD9AQ99638 391 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 TMEM206Q9H813 350 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 RC3H2Q9HBD1 1191 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 KIAA1468Q9P260 1216 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 STYXL1Q9Y6J8 313 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 UBE4BO95155 1302 aa16.94■□□□□ 0.3
RPUSD3-217ENST00000485705 ANK1P16157 1881 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 A0A0B4J269 797 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 TBKBP1A7MCY6 615 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 OFD1O75665 1012 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 RECQL4O94761 1208 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 MBD3O95983 291 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 BMP6P22004 513 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 ZBTB41Q5SVQ8 909 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 ZSWIM2Q8NEG5 633 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 PGBD4Q96DM1 585 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 CASD1Q96PB1 797 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 HCSTQ9UBK5 93 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 PARP2Q9UGN5 583 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
RPUSD3-217ENST00000485705 KIAA1671Q9BY89 1806 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 CLIC2O15247 247 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 MEFVO15553 781 aaPredicted RBP16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 TNFSF9P41273 254 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 GRM5P41594 1212 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 PRCPP42785 496 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 MORC3Q14149 939 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 POMGNT1Q8WZA1 660 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 ZFP42Q96MM3 310 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 GAD1Q99259 594 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 MSTO1Q9BUK6 570 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 GBP3Q9H0R5 595 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 NKX2-4Q9H2Z4 354 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 PCIF1Q9H4Z3 704 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 RSAD1Q9HA92 442 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 INPP5FQ9Y2H2 1132 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 INSL6Q9Y581 213 aa16.92■□□□□ 0.3
RPUSD3-217ENST00000485705 PDCD11Q14690 1871 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 NLRC5Q86WI3 1866 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 FAM189A1O60320 539 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 CA3P07451 260 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 MLH1P40692 756 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 HABP4Q5JVS0 413 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 SLFN12LQ6IEE8 588 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 LRRC55Q6ZSA7 311 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms