RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 NDST4Q9H3R1 872 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 AGO2Q9UKV8 859 aaKnown RBP15.86■□□□□ 0.13
LRIF1-202ENST00000485275 TNFSF13BQ9Y275 285 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 FRMD4BQ9Y2L6 1034 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 TRPV2Q9Y5S1 764 aa15.86■□□□□ 0.13
LRIF1-202ENST00000485275 KIAA0100Q14667 2235 aaKnown RBP15.86■□□□□ 0.13
LRIF1-202ENST00000485275 CLDN3O15551 220 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 COL6A1P12109 1028 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 KLK7P49862 253 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 BFSP1Q12934 665 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ZNF568Q3ZCX4 644 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 DCAF17Q5H9S7 520 aaPredicted RBP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 MPZL3Q6UWV2 235 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 TMEM192Q8IY95 271 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ANKRD20A12PQ8NF67 263 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 NOC2LQ9Y3T9 749 aaKnown RBP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 A0A1B0GUA9 196 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 EXTL3O43909 919 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ERLIN2O94905 339 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ATN1P54259 1190 aaPredicted RBP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 CDC42EP1Q00587 391 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 UBXN1Q04323 297 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 CYP24A1Q07973 514 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ZNF618Q5T7W0 954 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 SLFN12LQ6IEE8 588 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 MCOLN1Q9GZU1 580 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 AGPAT5Q9NUQ2 364 aa15.85■□□□□ 0.13
LRIF1-202ENST00000485275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
LRIF1-202ENST00000485275 PTPRJQ12913 1337 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 TANC1Q9C0D5 1861 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 PES1O00541 588 aaKnown RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 MAPK13O15264 365 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 CD4P01730 458 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 TFRCP02786 760 aaKnown RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 KCNH2Q12809 1159 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 MBTPS1Q14703 1052 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 ANP32BQ92688 251 aaKnown RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 MFSD14AQ96MC6 490 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 AGO3Q9H9G7 860 aaKnown RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 METTL14Q9HCE5 456 aaKnown RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 TOPORSQ9NS56 1045 aaPredicted RBP15.84■□□□□ 0.13
LRIF1-202ENST00000485275 NOD1Q9Y239 953 aa15.84■□□□□ 0.13
LRIF1-202ENST00000485275 CKBP12277 381 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 MATR3P43243 847 aaKnown RBP eCLIP15.83■□□□□ 0.124e-8■■□□□ 14.1
LRIF1-202ENST00000485275 PPP3CAQ08209 521 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 FILIP1LQ4L180 1135 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 CBWD6Q4V339 395 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 CBWD3Q5JTY5 395 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 CBWD5Q5RIA9 395 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 POP1Q99575 1024 aaKnown RBP15.83■□□□□ 0.12
LRIF1-202ENST00000485275 TCHPQ9BT92 498 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 EIF2AQ9BY44 585 aaKnown RBP15.83■□□□□ 0.12
LRIF1-202ENST00000485275 CPSF3Q9UKF6 684 aaKnown RBP15.83■□□□□ 0.12
LRIF1-202ENST00000485275 SIK3Q9Y2K2 1263 aa15.83■□□□□ 0.12
LRIF1-202ENST00000485275 LRRIQ3A6PVS8 624 aaPredicted RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 EPHB6O15197 1021 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 OGTO15294 1046 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 VAMP7P51809 220 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 OSTNP61366 133 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 APBA1Q02410 837 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 KCNMA1Q12791 1236 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 SYCP1Q15431 976 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 FAM26DQ5JW98 314 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 FBXO47Q5MNV8 452 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 RSPH3Q86UC2 560 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 PARD3BQ8TEW8 1205 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 CCDC127Q96BQ5 260 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 RALGAPA2Q2PPJ7 1873 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 M0QZ92 97 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 LRRN2O75325 713 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 AFPP02771 609 aaKnown RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 GHRP10912 638 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 GOLGA8FQ08AF8 430 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 GOLGA8DPQ0D2H9 430 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 TBX2Q13207 712 aaPredicted RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 LPIN1Q14693 890 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 UBXN11Q5T124 520 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 LMBRD2Q68DH5 695 aaPredicted RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 DPY19L2P1Q6NXN4 242 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 SLC39A5Q6ZMH5 540 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 THNSL1Q8IYQ7 743 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 MMRN2Q9H8L6 949 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 PDE11AQ9HCR9 933 aa15.82■□□□□ 0.12
LRIF1-202ENST00000485275 RBAKQ9NYW8 714 aaPredicted RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 PIN4Q9Y237 131 aaKnown RBP15.82■□□□□ 0.12
LRIF1-202ENST00000485275 UMODL1Q5DID0 1318 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms