RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	ADCYAP1R1	P41586	468 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	USP14	P54578	494 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	MCL1	Q07820	350 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	PIN1	Q13526	163 aa	Predicted RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	GPR19	Q15760	415 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	SNAPC4	Q5SXM2	1469 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	ABHD17C	Q6PCB6	329 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	OVCH1	Q7RTY7	1134 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	NLGN4X	Q8N0W4	816 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	NXPE1	Q8N323	547 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	SUPT20H	Q8NEM7	779 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	ZNF778	Q96MU6	729 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	GPR101	Q96P66	508 aa	Predicted RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	BOC	Q9BWV1	1114 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	KIF13A	Q9H1H9	1805 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	SERHL2	Q9H4I8	314 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	ZNF768	Q9H5H4	540 aa	Known RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	AASDHPPT	Q9NRN7	309 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	RIC8B	Q9NVN3	520 aa		5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	THG1L	Q9NWX6	298 aa	Known RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	RGS17	Q9UGC6	210 aa	Predicted RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.1	□□□□□ -1.59
VPS8-223	ENST00000485024	SLC12A8	A0AV02	714 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	SHTN1	A0MZ66	631 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	ZNF891	A8MT65	544 aa	Predicted RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	HIP1R	O75146	1068 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	CAND2	O75155	1236 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	RBMXL2	O75526	392 aa	Known RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	VCAM1	P19320	739 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	CCND1	P24385	295 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	ABCG1	P45844	678 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	MECP2	P51608	486 aa	Known RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	OTOP1	Q7RTM1	612 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	ZZZ3	Q8IYH5	903 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	CHPF	Q8IZ52	775 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	BCL6B	Q8N143	479 aa	Predicted RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	CPT1C	Q8TCG5	803 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	AHCYL2	Q96HN2	611 aa	Known RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	SMAD5	Q99717	465 aa	Known RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	ALG13	Q9NP73	1137 aa	Known RBP	5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	EMC7	Q9NPA0	242 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	TRHDE	Q9UKU6	1024 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	SORCS3	Q9UPU3	1222 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	MRFAP1	Q9Y605	127 aa		5.09	□□□□□ -1.59
VPS8-223	ENST00000485024	SCRIB	Q14160	1630 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	CEP164	Q9UPV0	1460 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	SRCAP	Q6ZRS2	3230 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	CCDC194	A0A1B0GVG4	234 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	CYP17A1	P05093	508 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	CT47B1	P0C2W7	299 aa	Predicted RBP	5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ATP2A2	P16615	1042 aa	Known RBP	5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	LSP1	P33241	339 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ECE1	P42892	770 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ZNF81	P51508	661 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ELL	P55199	621 aa	Predicted RBP	5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	TBX4	P57082	545 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	KRT85	P78386	507 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	DDB1	Q16531	1140 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	GPR158	Q5T848	1215 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	GRAMD4	Q6IC98	578 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	LHFPL2	Q6ZUX7	228 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	WDR75	Q8IWA0	830 aa	Known RBP	5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	SPATA3	Q8NHX4	192 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	CHTF18	Q8WVB6	975 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	SLC5A5	Q92911	643 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	RPL10L	Q96L21	214 aa	Known RBP	5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	WDR11	Q9BZH6	1224 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	SLC13A1	Q9BZW2	595 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	OR10A5	Q9H207	317 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	PCIF1	Q9H4Z3	704 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ACSS2	Q9NR19	701 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ZIM2	Q9NZV7	527 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	ANKFY1	Q9P2R3	1169 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	SPO11	Q9Y5K1	396 aa		5.08	□□□□□ -1.6
VPS8-223	ENST00000485024	UBE2QL1	A1L167	161 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	MAN2B1	O00754	1011 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	AKAP10	O43572	662 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	PLIN1	O60240	522 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	RFPL1	O75677	317 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	SNUPN	O95149	360 aa	Known RBP	5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	RAB27A	P51159	221 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	PTTG1IP	P53801	180 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	PHC1	P78364	1004 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	FOXI1	Q12951	378 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	KLF1	Q13351	362 aa	Predicted RBP	5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	FKBP15	Q5T1M5	1219 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	NAIF1	Q69YI7	327 aa	Predicted RBP	5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	NXN	Q6DKJ4	435 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	CCDC62	Q6P9F0	684 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	CCDC146	Q8IYE0	955 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	MYO1H	Q8N1T3	1032 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	CISD2	Q8N5K1	135 aa	Known RBP	5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	PSMD1	Q99460	953 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	POLR3GL	Q9BT43	218 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	CDH19	Q9H159	772 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	SLC6A15	Q9H2J7	730 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	SPTLC3	Q9NUV7	552 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	OXSM	Q9NWU1	459 aa		5.07	□□□□□ -1.6
VPS8-223	ENST00000485024	CYSRT1	A8MQ03	144 aa		5.06	□□□□□ -1.6
VPS8-223	ENST00000485024	ZNF561-AS1	K7EIQ3	104 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms