RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PCDHA13Q9Y5I0 950 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 RCCD1A6NED2 376 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 ACKR2O00590 384 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 PJA2O43164 708 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 KIF5CO60282 957 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 TOM1L1O75674 476 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 PRKCBP05771 671 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 FERP16591 822 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 PROZP22891 400 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 GPC3P51654 580 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 NLRP11P59045 1033 aaKnown RBP15.23■□□□□ 0.03
CLK3-204ENST00000483723 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 DRAP1Q14919 205 aaPredicted RBP15.23■□□□□ 0.03
CLK3-204ENST00000483723 MARCH8Q5T0T0 291 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 FMNL3Q8IVF7 1028 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 CCDC127Q96BQ5 260 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 ZBTB10Q96DT7 871 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 LACRTQ9GZZ8 138 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 PTPRHQ9HD43 1115 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 KAT6AQ92794 2004 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 RRN3P2A6NIE6 340 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 F8VZ95 297 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 FAM189A1O60320 539 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
CLK3-204ENST00000483723 F2P00734 622 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 GJB1P08034 283 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 SOX5P35711 763 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 MBTD1Q05BQ5 628 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 MCL1Q07820 350 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 NOGQ13253 232 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 GRIK4Q16099 956 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 SLC18A3Q16572 532 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 TSHZ1Q6ZSZ6 1077 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 SV2AQ7L0J3 742 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 KIAA1328Q86T90 577 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
CLK3-204ENST00000483723 METTL13Q8N6R0 699 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 KAT2BQ92831 832 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
CLK3-204ENST00000483723 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 IFT122Q9HBG6 1241 aa15.23■□□□□ 0.03
CLK3-204ENST00000483723 CNTNAP2Q9UHC6 1331 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 HAS3O00219 553 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 CLDN3O15551 220 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 KRT86O43790 486 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 LRRN2O75325 713 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 GFPT2O94808 682 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 C4BPAP04003 597 aaKnown RBP15.22■□□□□ 0.03
CLK3-204ENST00000483723 TMOD1P28289 359 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 CASQ1P31415 396 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 MAGEA1P43355 309 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 ACOT2P49753 483 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 FCGRTP55899 365 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 IGBP1P78318 339 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 MAP2K1Q02750 393 aaPredicted RBP15.22■□□□□ 0.03
CLK3-204ENST00000483723 PTK2Q05397 1052 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 PPFIA1Q13136 1202 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 TDRD12Q587J7 1177 aaKnown RBP15.22■□□□□ 0.03
CLK3-204ENST00000483723 ZNF571Q7Z3V5 609 aaPredicted RBP15.22■□□□□ 0.03
CLK3-204ENST00000483723 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 JAKMIP2Q96AA8 810 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 NENFQ9UMX5 172 aa15.22■□□□□ 0.03
CLK3-204ENST00000483723 WNT7BP56706 349 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 GFPT1Q06210 699 aaPredicted RBP15.21■□□□□ 0.03
CLK3-204ENST00000483723 GRM1Q13255 1194 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 ZACNQ401N2 412 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 ZNF569Q5MCW4 686 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 CCDC122Q5T0U0 273 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 ARHGEF19Q8IW93 802 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 FBXL13Q8NEE6 735 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 SYT11Q9BT88 431 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.03
CLK3-204ENST00000483723 TSGA10Q9BZW7 698 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 MINDY3Q9H8M7 445 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 TOPORSQ9NS56 1045 aaPredicted RBP15.21■□□□□ 0.03
CLK3-204ENST00000483723 PRMT7Q9NVM4 692 aaPredicted RBP15.21■□□□□ 0.03
CLK3-204ENST00000483723 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 TRIM10Q9UDY6 481 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 TNFSF13BQ9Y275 285 aa15.21■□□□□ 0.03
CLK3-204ENST00000483723 A0A087X0T9 212 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 OGTO15294 1046 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLK3-204ENST00000483723 FAM228BP0C875 321 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 PSMC4P43686 418 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 PHKA2P46019 1235 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ADAM17P78536 824 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
CLK3-204ENST00000483723 ARID5AQ03989 594 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 KIF5AQ12840 1032 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 AMHR2Q16671 573 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 ZBTB41Q5SVQ8 909 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 C10orf76Q5T2E6 689 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 BRSK2Q8IWQ3 736 aa15.2■□□□□ 0.02
CLK3-204ENST00000483723 KIAA0319LQ8IZA0 1049 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms