RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDLBP-239ENST00000483086 EPCAMP16422 314 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-239ENST00000483086 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
HDLBP-239ENST00000483086 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 PDE12Q6L8Q7 609 aaKnown RBP13.34□□□□□ -0.27
HDLBP-239ENST00000483086 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 CEP120Q8N960 986 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 CDCA3Q99618 268 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-239ENST00000483086 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 SNTG2Q9NY99 539 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 GIT1Q9Y2X7 761 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 IRAK3Q9Y616 596 aa13.34□□□□□ -0.27
HDLBP-239ENST00000483086 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.27
HDLBP-239ENST00000483086 DMDP11532 3685 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 SSTR3P32745 418 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 OR1G1P47890 313 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 NPTX2P47972 431 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 SLC12A3P55017 1021 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 PEX3P56589 373 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 RESTQ13127 1097 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 PRPF4BQ13523 1007 aaKnown RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 PTPAQ15257 358 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 TMEM130Q8N3G9 435 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 C12orf76Q8N812 135 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 DEPTORQ8TB45 409 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 GPR62Q9BZJ7 368 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ARHGAP28Q9P2N2 729 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-239ENST00000483086 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
HDLBP-239ENST00000483086 LOC730098B7Z3J9 87 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 RECQL4O94761 1208 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 ALDH2P05091 517 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 CNPP09543 421 aaKnown RBP13.32□□□□□ -0.28
HDLBP-239ENST00000483086 SYT1P21579 422 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
HDLBP-239ENST00000483086 MAPK6Q16659 721 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
HDLBP-239ENST00000483086 RSPH1Q8WYR4 309 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 KIFAP3Q92845 792 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 KLHL5Q96PQ7 755 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 LRFN3Q9BTN0 628 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-239ENST00000483086 HAPLN2Q9GZV7 340 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 PTPRHQ9HD43 1115 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 UBN1Q9NPG3 1134 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 PARP2Q9UGN5 583 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 MUTYHQ9UIF7 546 aa13.32□□□□□ -0.28
HDLBP-239ENST00000483086 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 VPS37CA5D8V6 355 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-239ENST00000483086 SOD2P04179 222 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 COL9A1P20849 921 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 CA8P35219 290 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 CABP7Q86V35 215 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 RNF135Q8IUD6 432 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-239ENST00000483086 ZBTB45Q96K62 511 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-239ENST00000483086 ACO2Q99798 780 aaKnown RBP13.31□□□□□ -0.28
HDLBP-239ENST00000483086 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 TARS2Q9BW92 718 aaKnown RBP13.31□□□□□ -0.28
HDLBP-239ENST00000483086 RAB34Q9BZG1 259 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 CDT1Q9H211 546 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
HDLBP-239ENST00000483086 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 C2CD2LO14523 706 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 N4BP3O15049 544 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 SLC16A4O15374 487 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 MYBP10242 640 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 PROZP22891 400 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 SP100P23497 879 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-239ENST00000483086 CLCN4P51793 760 aa13.3□□□□□ -0.28
HDLBP-239ENST00000483086 SOX4Q06945 474 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms