RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 COLGALT1Q8NBJ5 622 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 SLC17A8Q8NDX2 589 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 DNAJC19Q96DA6 116 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 BICD1Q96G01 975 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 ACO2Q99798 780 aaKnown RBP9.63□□□□□ -0.87
SNX4-205ENST00000482965 TCHPQ9BT92 498 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 CWH43Q9H720 699 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 KBTBD4Q9NVX7 518 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 TNFSF13BQ9Y275 285 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
SNX4-205ENST00000482965 LAMA2P24043 3122 aaKnown RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 A0A1W2PQ27 194 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 A0A1W2PQ64 194 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 A0A1W2PQD8 194 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 GOLGA6L4A6NEF3 574 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 LPXNO60711 386 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 AKAP5P24588 427 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 NMT1P30419 496 aaKnown RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 ABCD1P33897 745 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MLH1P40692 756 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.87
SNX4-205ENST00000482965 SYKP43405 635 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 LIG4P49917 911 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ASIC1P78348 528 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 PTPROQ16827 1216 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 MPZL3Q6UWV2 235 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ZPBP2Q6X784 338 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 THNSL1Q8IYQ7 743 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 FSIP1Q8NA03 581 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MAFAQ8NHW3 353 aaPredicted RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 PPM1EQ8WY54 764 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MRPS27Q92552 414 aaKnown RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 P2RX5Q93086 422 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ZNF558Q96NG5 402 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 FAM193BQ96PV7 902 aaPredicted RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 RPS6KC1Q96S38 1066 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 GAD1Q99259 594 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 TRIM9Q9C026 710 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 GBP3Q9H0R5 595 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 CDT1Q9H211 546 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
SNX4-205ENST00000482965 PANK4Q9NVE7 773 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 TBC1D13Q9NVG8 400 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 SNTG2Q9NY99 539 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 CHMP5Q9NZZ3 219 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 TBC1D7Q9P0N9 293 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 KANSL3Q9P2N6 904 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ANKFY1Q9P2R3 1169 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 TBX20Q9UMR3 447 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 MTCH2Q9Y6C9 303 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 ZMYM2Q9UBW7 1377 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 SZT2Q5T011 3432 aa9.62□□□□□ -0.87
SNX4-205ENST00000482965 FRMD3A2A2Y4 597 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ARL5CA6NH57 179 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 GRM6O15303 877 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ACTN4O43707 911 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 ZC3H11AO75152 810 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX4-205ENST00000482965 TOM1L1O75674 476 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 RECQL4O94761 1208 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 CSPG5O95196 566 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 GCNT3O95395 438 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 POMCP01189 267 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ITGB1P05556 798 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 SLFN14P0C7P3 912 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 MCF2P10911 925 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 POU3F3P20264 500 aaPredicted RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 PPM1AP35813 382 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 PBX3P40426 434 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 AFMP43652 599 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ALDH7A1P49419 539 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 SCNN1GP51170 649 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 AFF1P51825 1210 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 BCAR1P56945 870 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 GTF2BQ00403 316 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 COASYQ13057 564 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 NOLC1Q14978 699 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX4-205ENST00000482965 CCDC85BQ15834 202 aaPredicted RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 KCNT2Q6UVM3 1135 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 ZNF720Q7Z2F6 126 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 KCNN1Q92952 543 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 HVCN1Q96D96 273 aa9.61□□□□□ -0.87
SNX4-205ENST00000482965 MRPL38Q96DV4 380 aaKnown RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
SNX4-205ENST00000482965 ZFP42Q96MM3 310 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms