RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 OSBPL6Q9BZF3 934 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 PALMDQ9NP74 551 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 FGFR1OP2Q9NVK5 253 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 MOCS1Q9NZB8 636 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 PCDHGB3Q9Y5G1 929 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 ITSN1Q15811 1721 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 TSPAN9O75954 239 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 FYNP06241 537 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CHKAP35790 457 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CDK18Q07002 472 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 SGO2Q562F6 1265 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 WDR59Q6PJI9 974 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 IZUMO2Q6UXV1 221 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 VSIG1Q86XK7 387 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 ADSSL1Q8N142 457 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 TRIML2Q8N7C3 387 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 STMN2Q93045 179 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 INPP4AQ96PE3 977 aaPredicted RBP11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 OLFM1Q99784 485 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 TMEM109Q9BVC6 243 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 CAPN11Q9UMQ6 739 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 DOLKQ9UPQ8 538 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 PCDHGA11Q9Y5H2 935 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 MYH1P12882 1939 aa11.02□□□□□ -0.65
PRPF4B-206ENST00000481109 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 BCL9LQ86UU0 1499 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 A0A1W2PQC6 194 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 FUCA1P04066 466 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SLC5A2P31639 672 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 IFNA8P32881 189 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PIP4K2AP48426 406 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 POLGP54098 1239 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ERVK-9P63128 1117 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 MGAT5Q09328 741 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ASPHQ12797 758 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 MED21Q13503 144 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TNFAIP8L3Q5GJ75 292 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 CIB1Q99828 191 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 MYLK2Q9H1R3 596 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 HMGXB4Q9UGU5 601 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 IVNS1ABPQ9Y6Y0 642 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 MACROD2A1Z1Q3 448 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 CHL1O00533 1208 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 DDX3XO00571 662 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 DCTN3O75935 186 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 KRT36O76013 467 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ESRRBO95718 433 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TCEA1P23193 301 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ANXA13P27216 316 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 KRT76Q01546 638 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 DNAJC3Q13217 504 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 ACSBG2Q5FVE4 666 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 USP43Q70EL4 1123 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 CLVS1Q8IUQ0 354 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SPATA5Q8NB90 893 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PCYOX1LQ8NBM8 494 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 BORCS5Q969J3 196 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PGBD4Q96DM1 585 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 SAR1AQ9NR31 198 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TRNAU1APQ9NX07 287 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TMEM59LQ9UK28 342 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 CFL2Q9Y281 166 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 PCDHB4Q9Y5E5 795 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 AK5Q9Y6K8 562 aa11.01□□□□□ -0.65
PRPF4B-206ENST00000481109 TMEM131LA2VDJ0 1609 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 CES2O00748 559 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 ENPP3O14638 875 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 MCF2LO15068 1137 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 RAD51CO43502 376 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 ICMTO60725 284 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 RSL1D1O76021 490 aaKnown RBP11□□□□□ -0.65
PRPF4B-206ENST00000481109 TFAP2AP05549 437 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 ESRRAP11474 423 aaPredicted RBP11□□□□□ -0.65
PRPF4B-206ENST00000481109 IARSP41252 1262 aaKnown RBP11□□□□□ -0.65
PRPF4B-206ENST00000481109 SLC1A1P43005 524 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 CHN2P52757 468 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 PDE4DQ08499 809 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 KCTD21Q4G0X4 260 aa11□□□□□ -0.65
PRPF4B-206ENST00000481109 C6orf118Q5T5N4 469 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms