RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 FAM13AO94988 1023 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 PROZP22891 400 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 CASP1P29466 404 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 TXLNAP40222 546 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 SCNN1GP51170 649 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 HAUS6Q7Z4H7 955 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 ZBTB33Q86T24 672 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 SFR1Q86XK3 245 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 SYAP1Q96A49 352 aaPredicted RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 MRPL38Q96DV4 380 aaKnown RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
PTPRF-213ENST00000481019 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 GBP3Q9H0R5 595 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 CDT1Q9H211 546 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 PARVGQ9HBI0 331 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 RWDD3Q9Y3V2 267 aa13.44□□□□□ -0.26
PTPRF-213ENST00000481019 INPPL1O15357 1258 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 POLR2DO15514 142 aaKnown RBP13.43□□□□□ -0.26
PTPRF-213ENST00000481019 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
PTPRF-213ENST00000481019 LAG3P18627 525 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 SLC11A1P49279 550 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 BCAR1P56945 870 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 ERVFC1P60507 584 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 SEZ6Q53EL9 994 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 ADGRD2Q7Z7M1 963 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 GRAMD1CQ8IYS0 662 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 POF1BQ8WVV4 589 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 P2RX5Q93086 422 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 HPS3Q969F9 1004 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
PTPRF-213ENST00000481019 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 PARP2Q9UGN5 583 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 TNFSF13BQ9Y275 285 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
PTPRF-213ENST00000481019 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TISP43B9A030 160 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 K7ENM7 598 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 PTGESO14684 152 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TRAK2O60296 914 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 ZC3H11AO75152 810 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TBCAO75347 108 aaKnown RBP13.42□□□□□ -0.26
PTPRF-213ENST00000481019 RECQL4O94761 1208 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 GALTP07902 379 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 IGFBP6P24592 240 aaPredicted RBP13.42□□□□□ -0.26
PTPRF-213ENST00000481019 GTF2F1P35269 517 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPRF-213ENST00000481019 CASP5P51878 434 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 KCNA1Q09470 495 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TCEAL5Q5H9L2 206 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 SLC39A4Q6P5W5 647 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 THNSL1Q8IYQ7 743 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 CNNM3Q8NE01 707 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 GLIS3Q8NEA6 775 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 RABGGTAQ92696 567 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 ZNF558Q96NG5 402 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 STRA6Q9BX79 667 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 MRPL4Q9BYD3 311 aaKnown RBP13.42□□□□□ -0.26
PTPRF-213ENST00000481019 KBTBD4Q9NVX7 518 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TBX20Q9UMR3 447 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 PCDHB12Q9Y5F1 795 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
PTPRF-213ENST00000481019 TDRD15B5MCY1 1934 aaKnown RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 FRMD3A2A2Y4 597 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ANKRD63C9JTQ0 380 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ACTN4O43707 911 aaKnown RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 HARSP12081 509 aaKnown RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 PFKFB1P16118 471 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 SMTNP53814 917 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 OSTNP61366 133 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 GTF2BQ00403 316 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 RNASELQ05823 741 aaKnown RBP13.41□□□□□ -0.26
PTPRF-213ENST00000481019 DSC1Q08554 894 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 NAB2Q15742 525 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ZNF568Q3ZCX4 644 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ZBTB41Q5SVQ8 909 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 ADALQ6DHV7 355 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 URGCPQ8TCY9 931 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 KCNN1Q92952 543 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 PAAF1Q9BRP4 392 aa13.41□□□□□ -0.26
PTPRF-213ENST00000481019 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms