RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COL4A3BPQ9Y5P4 624 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 MYH11P35749 1972 aa9.83□□□□□ -0.84
DDX56-211ENST00000479602 UBE4BO95155 1302 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 GOLGA6L4A6NEF3 574 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 E9PMD0 336 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 PPP1R37O75864 691 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 EOMESO95936 686 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 PIGRP01833 764 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 NDUFA8P51970 172 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 NCKAP1LP55160 1127 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 NLRP11P59045 1033 aaKnown RBP9.82□□□□□ -0.84
DDX56-211ENST00000479602 PTENP60484 403 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 ZXDAP98168 799 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 POU5F1Q01860 360 aaKnown RBP9.82□□□□□ -0.84
DDX56-211ENST00000479602 TFDP1Q14186 410 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 KCNB1Q14721 858 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 ARSHQ5FYA8 562 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 CLLU1OSQ5K130 101 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 PLA2G4FQ68DD2 849 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 KRBA2Q6ZNG9 492 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 EP400NLQ6ZTU2 488 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 RBM23Q86U06 439 aaKnown RBP9.82□□□□□ -0.84
DDX56-211ENST00000479602 ECHDC2Q86YB7 292 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 MRPL43Q8N983 215 aaKnown RBP9.82□□□□□ -0.84
DDX56-211ENST00000479602 FSIP1Q8NA03 581 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 UIMC1Q96RL1 719 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 FIZ1Q96SL8 496 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 RUSC1Q9BVN2 902 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 STRA6Q9BX79 667 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 TMEM134Q9H6X4 195 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 TLE6Q9H808 572 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 IFT122Q9HBG6 1241 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 PARVGQ9HBI0 331 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 NGRNQ9NPE2 291 aaKnown RBP9.82□□□□□ -0.84
DDX56-211ENST00000479602 CHST12Q9NRB3 414 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 LMBRD1Q9NUN5 540 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 GINS2Q9Y248 185 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 SPTBN4Q9H254 2564 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 CFAP54Q96N23 3096 aa9.82□□□□□ -0.84
DDX56-211ENST00000479602 FNDC1Q4ZHG4 1894 aaPredicted RBP9.81□□□□□ -0.84
DDX56-211ENST00000479602 GVINP1Q7Z2Y8 2422 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 FSD2A1L4K1 749 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 DENND3A2RUS2 1198 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 HIDE1A8MVS5 230 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 ZBTB39O15060 712 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 POLR2DO15514 142 aaKnown RBP9.81□□□□□ -0.84
DDX56-211ENST00000479602 ZNF623O75123 536 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 ZNF202O95125 648 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 PLS3P13797 630 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 LAG3P18627 525 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 AXLP30530 894 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 NDUFV1P49821 464 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 CLCN3P51790 818 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 SNRPFP62306 86 aaKnown RBP9.81□□□□□ -0.84
DDX56-211ENST00000479602 DRP2Q13474 957 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 GIT2Q14161 759 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 IER5LQ5T953 404 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 ANKRD54Q6NXT1 300 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 KCNT2Q6UVM3 1135 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 RBM43Q6ZSC3 357 aaKnown RBP9.81□□□□□ -0.84
DDX56-211ENST00000479602 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 SLC39A11Q8N1S5 342 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 METTL13Q8N6R0 699 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 CCDC113Q9H0I3 377 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 GOLPH3LQ9H4A5 285 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 HOOK1Q9UJC3 728 aaKnown RBP9.81□□□□□ -0.84
DDX56-211ENST00000479602 IRAK3Q9Y616 596 aa9.81□□□□□ -0.84
DDX56-211ENST00000479602 A0A1B0GVL5 298 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 C2orf71A6NGG8 1288 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 EIF3DO15371 548 aaKnown RBP eCLIP9.8□□□□□ -0.84
DDX56-211ENST00000479602 HOXA2O43364 376 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 USO1O60763 962 aaKnown RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 HOXB8P17481 243 aaPredicted RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
DDX56-211ENST00000479602 GLRA2P23416 452 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 PPP1R2P41236 205 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 PHKA2P46019 1235 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 GTF2BQ00403 316 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 LAMTOR4Q0VGL1 99 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 PSMD2Q13200 908 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 CAPSQ13938 189 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 BMT2Q1RMZ1 405 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 SPECC1Q5M775 1068 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 ALYREFQ86V81 257 aaKnown RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 LRRC71Q8N4P6 559 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 TRIML1Q8N9V2 468 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 PRPF31Q8WWY3 499 aaKnown RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 DDX12PQ92771 950 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 IFT74Q96LB3 600 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 GSDMAQ96QA5 445 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 GCOM2Q9BZD3 368 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms